Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00935 ATGGCTGGAATTTCTCAACAAAGGGTCAAAATCTGTTTGGTCTTATGTCTTGTTGGGATAGTTTCAGCTTCAACATATTCAACATCTTCATCATCAACAACTAGTTCTGGCACTTCATCTAATTCTCTGCTAAACCCCCTTTTTTATGCTATCAAGTGTCCCCAAGCCCTTGGCACCATTAAGACTCTAGTAAACAATGCTGTAGCAAAAGAGCCTCGCATGGGTGCTTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGATGTGATGCATCGGTCTTGTTAGCGGACACAGCAACTTTCAAAGGCGAACAAAATGCCTTACCTAACGCGAATTCTCTAAGGGGTTTTGAAGTCGTAGAGAGCATAAAAGCTGTACTAGAGCGTCAATGCCCCGGTGTTGTATCTTGCGCTGACATCTTAGCAGTTGCTGCAAGGGATTCTGTTGTTGCTCTTGGTGGACTTGGATGGTCTGTTGGCTTGGGCAGAAGAGACTCAACCACTGCAAGTTTCAGTGGAGCCAACTCTGATCTACCATCTCCCTTTCTCAATCTTGATGGTCTTATCGCTGCCTTCCAAAAGAAGCTTTTCACACCAAATGAAATGGTTGCTTTATCAGCAGGTGCTCACACAATTGGCAGTGCCAGATGTTTACTATTCCGATCAAGGATTTATAACGAGAGCGATATAGACTCCACTTATGCAAACCAAATGAGAGCTCATTGTCCCAAGGTTGGTGGTGATAGCAACTTGTCTCCCATAGACATCACCACCAAACATGTTTTCGACGGTGCTTACTACACAAATTTAATTAACAAAAAGGGTCTTATGTGGCGGTTCCACGGCCACCCAGCAACCTTAGCCCACTCACCGGCACGCAGGGTCAGATCAGAAAAGTGTGCAGCAGAGTGA 918 0.451 MAGISQQRVKICLVLCLVGIVSASTYSTSSSSTTSSGTSSNSLLNPLFYAIKCPQALGTIKTLVNNAVAKEPRMGASLLRLHFHDCFVQGCDASVLLADTATFKGEQNALPNANSLRGFEVVESIKAVLERQCPGVVSCADILAVAARDSVVALGGLGWSVGLGRRDSTTASFSGANSDLPSPFLNLDGLIAAFQKKLFTPNEMVALSAGAHTIGSARCLLFRSRIYNESDIDSTYANQMRAHCPKVGGDSNLSPIDITTKHVFDGAYYTNLINKKGLMWRFHGHPATLAHSPARRVRSEKCAAE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00935 305 SUPERFAMILY Heme-dependent peroxidases 44 279 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 FunFam Peroxidase 47 188 - -
Vimu9g00935 305 Gene3D Peroxidase, domain 2 181 279 - -
Vimu9g00935 305 Pfam Peroxidase 62 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 ProSiteProfiles Plant heme peroxidase family profile. 43 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PANTHER PEROXIDASE 72-RELATED 42 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 Gene3D - 48 180 - -
Vimu9g00935 305 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 CDD secretory_peroxidase 44 279 IPR033905 GO:0004601|GO:0042744
Vimu9g00935 305 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Vimu9g00935 305 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00935 305 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00935 Vimu-Chr9 15560061 15562152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00935 48 279 Peroxidase AT5G05340 55.556 2.77e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00935 K00430 - gmx:100811432 365.54