Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00927 ATGGCTGGAATTTCTCAACAAAGGGTCAAAATCTGTTTGGTCTTATGTCTTGTTGGGATAGTTTCAGCTTCAACATATTCAACATCTTCATCATCAACAACTAGTTCTGGCACTTCATCTAATTCTCTGCTAAACCCCCTTTTTTATGCTATCAAGTGTCCCCAAGCCCTTGGCACCATTAAGACTCTAGTAAACAATGCTGTAGCAAAAGAGCCTCGCATGGGTGCTTCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGATGTGATGCATCGGTTTTGTTAGCGGACACAGCAACTTTCACAGGGGAACAAAGTGCCTTACCTAACGTGAATTCTCTAAGGGGTTTTGAAGTCGTAGAGAGCATAAAAGCTGCACTAGAGTATGAATGCCCCGGTGTTGTATCTTGCGCTGACATCTTAGCAGTTGCTGCAAGGGATTCTGTTGTTGCTCTTGGTGGACCTGGATGGCCTGTTGGCTTGGGCAGAAAAGACTCAACCACTGCAAGTTTCAGCGAAGCGAGCTCTGATCTACCATCTCCCTTTCTCAATCTTGATGGTCTTATCGATGCCTTCCAAAAGAAGCTATTCACCGCAAATGAAATGGTGGCTTTATCAGGTGCTCACACAATTGGCAGTGCCAGATGTTTACTGTTCCGATCAAGGATTTATAACGAGAGTGATATAGACCCCTCTTATGCAACCCAAACGAGAGCTAATTGTCCCAAGGTTGGTGGTGATAGCAACTTGTCTCCCATAGACATCACCACTAAACATTCTTTCGACAATGCTTACTACACAAATTTAATTAACATTAAGGGTCTTTTCCACTCTGATCAACAACTCTTCAGTGGCGGTTCCACGGCCACCCAGGTCAAATCTTACAGCACTTTCCCGTTACTCTTTAAACTCGATTTCGCTAACGCCATGCTCAAGATGAGCAACCTTAGCCCACTCACCGGCACGCAGGGTCAGATCAGAAAAGTGTGCAGCAGAGTAAATTGA 1011 0.4471 MAGISQQRVKICLVLCLVGIVSASTYSTSSSSTTSSGTSSNSLLNPLFYAIKCPQALGTIKTLVNNAVAKEPRMGASLLRLHFHDCFVQGCDASVLLADTATFTGEQSALPNVNSLRGFEVVESIKAALEYECPGVVSCADILAVAARDSVVALGGPGWPVGLGRKDSTTASFSEASSDLPSPFLNLDGLIDAFQKKLFTANEMVALSGAHTIGSARCLLFRSRIYNESDIDPSYATQTRANCPKVGGDSNLSPIDITTKHSFDNAYYTNLINIKGLFHSDQQLFSGGSTATQVKSYSTFPLLFKLDFANAMLKMSNLSPLTGTQGQIRKVCSRVN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00927 336 FunFam Peroxidase 181 315 - -
Vimu9g00927 336 PANTHER PEROXIDASE 72-RELATED 42 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 CDD secretory_peroxidase 44 335 IPR033905 GO:0004601|GO:0042744
Vimu9g00927 336 ProSiteProfiles Plant heme peroxidase family profile. 43 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 Gene3D - 48 333 - -
Vimu9g00927 336 FunFam Peroxidase 47 188 - -
Vimu9g00927 336 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 Gene3D Peroxidase, domain 2 181 315 - -
Vimu9g00927 336 SUPERFAMILY Heme-dependent peroxidases 44 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 Pfam Peroxidase 62 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu9g00927 336 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Vimu9g00927 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00927 Vimu-Chr9 15251721 15253943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00927 48 336 Peroxidase AT5G05340 57.388 2.65e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00927 K00430 - gmx:100811432 452.21