Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00919 ATGGATTCTAGGAGGCGTAGAAATATGCAGCGCAAGTTGCAACAACTTCGATCGGTCACAAACTCCAGTGCTGTTAACAAAGCCTCAATTATTGTGGATGCCACAAGATACATAGAGGAGCTGAAGCAAAAAGTCGATGGACTGAACTCTGAGCTTGGAACCGCTGAATCATCAATCTCCCATGGCGAATTACCCATGGTCACCGTAGAAACCCTAGAAAGGGGTTTCCTCATAAATGTGTTTTCAGAAAGGAATTGCCCCGGCATGCTTGGGGCAATTCTGGACGCGTTTGAAGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTGAAGCTGTTGGAGGAGAAAGTGAAGAGAAGGAAAGCATCGATGCACAAGTGGTGAAGCAAGCAGTGATGCAAGCAATCCAAAATATGGATTAA 444 0.455 MDSRRRRNMQRKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGTAESSISHGELPMVTVETLERGFLINVFSERNCPGMLGAILDAFEELGLDVLDARVSCEDTFQLEAVGGESEEKESIDAQVVKQAVMQAIQNMD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00919 147 Gene3D - 1 63 IPR036638 GO:0046983
Vimu9g00919 147 CDD ACT_UUR-ACR-like 87 143 - -
Vimu9g00919 147 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 143 - -
Vimu9g00919 147 Coils Coil 31 58 - -
Vimu9g00919 147 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 62 IPR036638 GO:0046983
Vimu9g00919 147 Coils Coil 136 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00919 Vimu-Chr9 15123622 15125032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00919 4 123 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 30.189 3.20e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00919 - - gmx:100500546 263.077