Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00886 ATGCAAATTGCTAGTGTAAAAGTCAGCACCAATGTCCTTCATGTCAACATGAGTGCATCCAATGGAATGAGCAGCGTCAACAAGAACATGATCCACCCACTCCTCCCTGCAAATTTGAATCAACTCCTGGACAAGAATAACCACACACCGCATGGAAGCCTTCCTAAACTCAGAAACGATCTCGTCGTTGGAGTTAACAGGGAAAAGGAGGGGAACCTCGAGAAGATTGCTTCCGGCGCGAGTGACGTACGCTTCCATGGATTTCTTGACGGCACCGTAAGCATAGTGAAGCATGAGGATGACATCACCTTTCTAGAATCTTCCTTCGCGAAAGTTCCATGCGGTGTGTTGGAGGACGATGGCAGCATCGGTGGTGGCGTTGTCGACAATGGAGATCTCATCGACGTGGTCGGCGTTGACGAGGATGCCGGTTTTGAGGTCATTGAAGTAGAAGTGGTTGGGCTAGCGGAGGTACCGGAGCTGCCAGCGGTGCTGGGCAGCGATGATGGAGGCCTAAAACTCAACTTTCCCAATTTCATTTCTATTTGCAACTGGCCAATTTCTTATCCTATAATCGGAAACCTCTCCCAACTCAAACAACCTTACCACCGCACATTCACTCAAATGGCGCAAAAATACGGTCCAGTCTTCTCTCTTTGGTTCGGTAACCGACTCGTTGTCGTCCTTACTTCACAATCCGCGGTGCAAGAGTGCTTCACCAAAAACGACATCGTGTTGGCGAACCGACCTCACTTTCTGTTTGGCAAATACATCAGCTACAATAACAGCACCATCCTTCACTCCTCCTATGGCGACCACTGGCGGCACCTCCGTCGCATCTTGTCGTTGGAGGTTGTCTCAGCGACCCGTTTAAACTCCTTCTACGAGGTCCGAAGGGACGAAATCATGAGGCTGGTGCAAAAGCTCGCTAAGCTCTCATCAAACGACTTCACGAAAGTGGATCTAAAAACTATGTGA 978 0.4939 MQIASVKVSTNVLHVNMSASNGMSSVNKNMIHPLLPANLNQLLDKNNHTPHGSLPKLRNDLVVGVNREKEGNLEKIASGASDVRFHGFLDGTVSIVKHEDDITFLESSFAKVPCGVLEDDGSIGGGVVDNGDLIDVVGVDEDAGFEVIEVEVVGLAEVPELPAVLGSDDGGLKLNFPNFISICNWPISYPIIGNLSQLKQPYHRTFTQMAQKYGPVFSLWFGNRLVVVLTSQSAVQECFTKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSATRLNSFYEVRRDEIMRLVQKLAKLSSNDFTKVDLKTM 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00886 325 Pfam Cytochrome P450 188 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00886 325 Gene3D Cytochrome P450 181 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00886 325 PRINTS E-class P450 group I signature 234 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00886 325 PRINTS E-class P450 group I signature 210 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00886 325 PANTHER CYTOCHROME P450 82C3-RELATED 188 315 - -
Vimu9g00886 325 SUPERFAMILY Cytochrome P450 186 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00886 Vimu-Chr9 13860838 13863229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00886 177 325 Cytochrome P450 AT4G37370 52.318 4.37e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00886 K13260 - pvu:PHAVU_004G0682000 237.654