Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu9g00884 | ATGTCTTTCAGTTTCACTGACCTACTTTCTAACAGCAATAGCTTAACCATGGATGATGATCCTTTTGGACTTGAATTTCCTAACACTTTCAAACAACTTCAACCTCTCCCTTCTTATTCTGAGTTCCCACCTGGTTTTGCTCCAACAACACAGTCATTGAACTCACCCCTCTTGTTTTCTTCTCAGAATGTAAGTTTACCATCAGTTATCGCCATTATTGTACCTGATGAAAAAGTGTTTTTCCTTTGGGTTCCTGCATCATACACAAATGAGTCATCTTCCAGCATGAGCTTCAACATGAGAAACAGTTCAACTGTGAACCAGCTAGGAAACAAGGAGGAAGAGAGAAACTACTCTGACTTCTCTTTCCTAACAAAAACAAACCACATGCCTCTCTTTCAATCTTCCACAAGCATGTTTCAAGTGGAGCCACTAAAGAAACAGGACACAATGATATTCAACGAAGCTGCAAAGCAAACAGATTTCTCATCCGAGAGGACAGAAACAAAATCTGAATATGCAACAACTCAGGGCTTCTCCACAGAAGTTGTCTCAATCAAACCTGAAATACAAAGCAATTCTACTTCTGGGTCTGTTCAATTTAACTCCAACAATGCTTTTAAGTCCATTAGAGAGCAAAGGAGATCAGAAGATGGGTACAATTGGAGGAAGTATGGAGAGAAACAAGTGAAAGGAAGTGAGAATCCACGCAGTTATTACAAGTGCACTTATCCAAATTGTCCAACAAAGAAGAAAGTTGAGAGGTCTTTGGAGGGACATGTTACTGAAATAGTATACAGGGGAAGTCACAATCATCCTAAGCCACATAATAGAAAAAATGGCTCTCAATCAATGCATCAAACTTCTTCATCCTGCACCATCTCTGGGATTTCAGATCAGTCTATTGGAGAGGAAGATTTTGAACAAACATCACAAACTAGTTGCTCTGGAGGAGTTGATGATGATGACTTTGGTCCTGAGGCCAAAAGATGGAAGGGAGAGAATGAAAATGATGACTATTCTAATTCTTCAGCTGGGAGTAGAACTGTTAAGGAGCCTAGAGTTGTGGTTCAAACCACAAGTGAAATTGACGTACTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTGGTCAAAGGAAACCCAAACCCAAGGAGTTACTACAAATGCGTAGCCCCAGGTTGTCCAGTGAGAAAACATGTTGAGAGAGCTGCAAATGACATGAAAGCTGTGCTAACAACCTATGAAGGGAAACATAACCATGATGTTCCTTTAGGACGAGGAAATGCAAGCTATAACAGAGCTTCTCTAAACAACAACACCAGCAATGTAACAGCACCTGCCCCAATAAGGCCTTCAGCAGTGAATAATTATTCTAACTCAGCAAGTTTCATCAATTCACTCCCAGACACAAAGCTCTCAGCATCTGCAAGTCAAGAAGCTGTTCCGATGGACATGTTGCTGAGCCCTGGAAGCCTAGGATTTTCGTCTAATGACTCATTCCTTCAGTCTTTTTTCTCAAAGAACTTCTAA | 1539 | 0.4068 | MSFSFTDLLSNSNSLTMDDDPFGLEFPNTFKQLQPLPSYSEFPPGFAPTTQSLNSPLLFSSQNVSLPSVIAIIVPDEKVFFLWVPASYTNESSSSMSFNMRNSSTVNQLGNKEEERNYSDFSFLTKTNHMPLFQSSTSMFQVEPLKKQDTMIFNEAAKQTDFSSERTETKSEYATTQGFSTEVVSIKPEIQSNSTSGSVQFNSNNAFKSIREQRRSEDGYNWRKYGEKQVKGSENPRSYYKCTYPNCPTKKKVERSLEGHVTEIVYRGSHNHPKPHNRKNGSQSMHQTSSSCTISGISDQSIGEEDFEQTSQTSCSGGVDDDDFGPEAKRWKGENENDDYSNSSAGSRTVKEPRVVVQTTSEIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCVAPGCPVRKHVERAANDMKAVLTTYEGKHNHDVPLGRGNASYNRASLNNNTSNVTAPAPIRPSAVNNYSNSASFINSLPDTKLSASASQEAVPMDMLLSPGSLGFSSNDSFLQSFFSKNF | 512 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu9g00884 | 512 | ProSiteProfiles | WRKY domain profile. | 361 | 426 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | Pfam | WRKY DNA -binding domain | 217 | 273 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | Pfam | WRKY DNA -binding domain | 367 | 423 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | SMART | WRKY_cls | 216 | 274 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | SMART | WRKY_cls | 366 | 425 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | SUPERFAMILY | WRKY DNA-binding domain | 358 | 426 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | MobiDBLite | consensus disorder prediction | 338 | 353 | - | - | |
Vimu9g00884 | 512 | MobiDBLite | consensus disorder prediction | 322 | 337 | - | - | |
Vimu9g00884 | 512 | MobiDBLite | consensus disorder prediction | 280 | 318 | - | - | |
Vimu9g00884 | 512 | FunFam | WRKY transcription factor | 203 | 276 | - | - | |
Vimu9g00884 | 512 | MobiDBLite | consensus disorder prediction | 265 | 353 | - | - | |
Vimu9g00884 | 512 | ProSiteProfiles | WRKY domain profile. | 211 | 275 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | FunFam | WRKY transcription factor 33 | 353 | 419 | - | - | |
Vimu9g00884 | 512 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 137 | 445 | IPR044810 | GO:0003700 | |
Vimu9g00884 | 512 | SUPERFAMILY | WRKY DNA-binding domain | 211 | 275 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | Gene3D | WRKY domain | 351 | 427 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vimu9g00884 | 512 | Gene3D | WRKY domain | 201 | 276 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu9g00884 | Vimu-Chr9 | 13771900 | 13774872 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu9g00884 | 211 | 462 | WRKY Transcription Factor Family | AT2G38470 | 58.042 | 3.53e-106 | 325 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vimu9g00884 | WRKY | 9.8e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu9g00884 | K13424 | - | gmx:100127367 | 797.734 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu6g00078 | 6 | 946589 | 948991 | Vimu9g00884 | 9 | 13771900 | 13774872 | PCT |