Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00844 ATGTGTTGTGTCATTGCTTCTGATACTGATTGTGTTGTGATTTATCTGATTCTAACAAATGCAGCTCGTGGGCCTGAAATTGTTATTGAATGGCCAACAAGGATGAAGGTAATGATTGGAGTGACTAGGGGCTTGAGCTACCTCCATAGCCAAGAGAACATTGTACATGGGAACCTCACATCAAGCAACATACTATTGGATGAGCAAACAGAAGCCCACATAACAGATTTTGGTCTCTCAAGGCTGATGACAACTTCTGCCAACACCAACATCATTGCCACTGCAGGAAGCCTTGGCTACAACGCACCAGAGCTTTCAAAGACCAAGAAGCCTAACACAAAGACTGATGTGTACAGTCTTGGTGTTATCATGTTGGAACTCCTAACTGGAAAGCCACCTGGGGAGCCAACCAATGGCATGGACTTGCCCCAATGGGTTGCCTCCATAGTGAAGGAAGAGTGGACTAATGAAGTGTTTGATCTGGAACTCATGAGGGATGCACCAGCCATAGGAGATGAACTGCTTAACACATTGAAATTAGCACTGCATTGTGTTGATCCATCTCCTGCTGCTAGGCCTGAAGTACACCTAGTTCTGCAGCAATTGGAGGAGATCAAACCAGACTTGGCTGCAGGGGATGATGGAGCTACCAAGGTTCAAACAGCTGAGTAA 672 0.4583 MCCVIASDTDCVVIYLILTNAARGPEIVIEWPTRMKVMIGVTRGLSYLHSQENIVHGNLTSSNILLDEQTEAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPNTKTDVYSLGVIMLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPAARPEVHLVLQQLEEIKPDLAAGDDGATKVQTAE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00844 223 Gene3D Transferase(Phosphotransferase) domain 1 17 218 - -
Vimu9g00844 223 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 205 - -
Vimu9g00844 223 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00844 223 SUPERFAMILY Protein kinase-like (PK-like) 24 207 IPR011009 -
Vimu9g00844 223 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 15 209 - -
Vimu9g00844 223 Pfam Protein kinase domain 34 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00844 Vimu-Chr9 13033845 13034516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00844 22 207 Receptor kinase-like Gene Family AT3G51740 75.806 2.63e-99 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vimu9g00844 Pkinase 1.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00844 - - gmx:100799290 382.104