Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00840 ATGGGAGGGTGTTACAGCCATGTTTCAGTTCACGATGTGGAATGTTCATGTAAGCATCACCATGATGATGGTGCATGTGAACATGGTGGGGACAGTATCAGGTTAAGAAGGTCCTGTGAGTTTGTATCAATGTACAGCAAAAAGGGTTCAAAAGGAGTTAATCAAGATGCATTGACCGTGTGGAAGGACTTCACTGGAAAGAAGGACATGATCTTTTGTGGGGTGTTTGATGGTCATGGTCCTCTAGGGCATAAGTTTTCACAGTCTATACGTGACAAGCTACCCTCAAAACTCTCAGCATCAATCAAACAGTCACAAACACAAAAGGTCATCAAACACAATGAGATTAATCCTACAGATGGTGAGGAGGATAACCAAAACATGTCATTTTCTTCATGGGAGGGAAGCTTCATGAGGTGCTTCAGGGAAATGGATGAAGACCTTGCCAAGAACATAGACACTAAAGGATTTCTTGGGGGTAGCACTGCTGTAACTGTTATCAAACAGGGTGACCAATTAATAATTGGCAATTTGGGGGATTCTCGTGCAGTTCTCTGCAGAAGAGCACATGACAACCATCTTGTTCCTGTTCAACTTACTGTTGACTTGACCCCAGATATTCCAAGTGAAGCTTTAAGAATAACTAATTGCGGAGGTAGAATTTTTTCTGCAAAAGGAGATCCCTACGTAAATAGGATATGGAGGCCAAATGGGGATCGCCCTGGTCTAGCTATGGCAAGAGCCTTCGGAAATTTTTGCCTGAAAGATTATGGTCTCACCTCAGTCCCCGATGTATCATACAGAAAACTTACCAAGCAGGATGAGTTTGTGGTTTTGGCTTCTGATGGGGTATGGGATGTGCTAACAAACAGTGAAGTAATAAACATAGTTGCTTCAGCACCGAAAAGGTCCATGGCAGCCAAATTGTTAGTGAAACACGCAGTTCAAGCTTGGAGACGCAAGTGTTTCAAGGTTGATGATTGTACAGCTATATGCTTGTTCCTGAAGGATTAG 1014 0.429 MGGCYSHVSVHDVECSCKHHHDDGACEHGGDSIRLRRSCEFVSMYSKKGSKGVNQDALTVWKDFTGKKDMIFCGVFDGHGPLGHKFSQSIRDKLPSKLSASIKQSQTQKVIKHNEINPTDGEEDNQNMSFSSWEGSFMRCFREMDEDLAKNIDTKGFLGGSTAVTVIKQGDQLIIGNLGDSRAVLCRRAHDNHLVPVQLTVDLTPDIPSEALRITNCGGRIFSAKGDPYVNRIWRPNGDRPGLAMARAFGNFCLKDYGLTSVPDVSYRKLTKQDEFVVLASDGVWDVLTNSEVINIVASAPKRSMAAKLLVKHAVQAWRRKCFKVDDCTAICLFLKD 337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00840 337 SUPERFAMILY PP2C-like 41 336 IPR036457 -
Vimu9g00840 337 CDD PP2Cc 41 335 IPR001932 -
Vimu9g00840 337 SMART PP2C_4 35 333 IPR001932 -
Vimu9g00840 337 Gene3D - 36 337 IPR036457 -
Vimu9g00840 337 ProSiteProfiles Zinc finger SWIM-type profile. 6 37 IPR007527 GO:0008270
Vimu9g00840 337 Pfam Protein phosphatase 2C 66 316 IPR001932 -
Vimu9g00840 337 ProSiteProfiles PPM-type phosphatase domain profile. 41 335 IPR001932 -
Vimu9g00840 337 PANTHER PROTEIN PHOSPHATASE 34 333 IPR015655 GO:0004722|GO:0006470
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu9g00840 Vimu-Chr9 13006320 13008133 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00840 38 337 PP2C-type Phosphatase Gene Family AT1G16220 49.057 4.61e-106 317