Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00811 ATGAAAGACACTTGTTCATGGTTTGGTTTTAAGGTGGAGCTAGTAGAAGGGTCATCATACCTTGGGCAACCACTTCCATTCTCAATCACCACATTGATTTGGATCGAGGTTTTGGTAATTGGGTACATAGAGTTCCAGAGGAATGCAGAGCTTGACCCAGAAAAGAGACTGTACCCAGGTGGGAGCTACTTCGACCCTCTTGGTTTGGCCTCAGACCCAGAGAAGAAAGCCACTCTTCAATTGGCAGAGATCAAGCACGCACGTCTTGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCTGCTGCCACTGGCAAGGGCCCACTCAACAACTGGGCCACCCACTTGAGTGACCCACTTCACACAACCATCATTGACACCTTCTCCTCGTCTTCTTAA 399 0.4962 MKDTCSWFGFKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00811 132 Gene3D Chlorophyll a/b binding protein domain 1 132 - -
Vimu9g00811 132 Pfam Chlorophyll A-B binding protein 19 101 IPR022796 -
Vimu9g00811 132 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 127 IPR001344 GO:0009765|GO:0016020
Vimu9g00811 132 SUPERFAMILY Chlorophyll a-b binding protein 19 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00811 Vimu-Chr9 12624013 12624411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00811 11 131 Chloroplast and Mitochondria Gene Families AT3G08940 94.215 2.92e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00811 K08915 - gmx:100785180 246.514