Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00810 ATGGCCACCGCAACGGCTACGGCAGCGGCAACGTCCTCCTTCATGGGGACGCGCCTCCTGGACGCGCATTCCGGGTCAGGGCGGATCCAGGCACGATTCGGGTTCGGGTCGAAGAAGAAGGCCGCGCCCAAGAAGGTGTCGAAGGGCCCAAGCACGGACAGGCCGTTGTGGTACCCCGGCGCGAAGGCGCCGGAGTGGCTGGACGGGAGCCTTGTTGGTGACTACGGATTCGACCCGTTCGGGCTCGGGAAGCCCGCGGAGTATTTGCAGTTTGAACTGGACTCGCTGGACCAGAACCTGGCCAAGAACGAAGCCGGGATCATCATCGGAACCAGGACAGAGGCTGCGGACGTGAAGTCGACGCCGTTCCAGCCCTACAGCGAGGTCTTCGGCCTCCAGAGGTTCCGCGAATGCGAGCTCATCCATGGACGCTGGGCCATGCTCGCCACGCTCGGAGCCCTCTCCGTCGAGTGGCTCACCGGTGTCACGTGGCAGGACGCCGGCAAGGTACGATTCTCTGCTGTTGCTTCTTCTCCTCTTATCAATCATTTCCTTCCAATTCACTTTTAG 570 0.6228 MATATATAAATSSFMGTRLLDAHSGSGRIQARFGFGSKKKAAPKKVSKGPSTDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGIIIGTRTEAADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVRFSAVASSPLINHFLPIHF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00810 189 Pfam Chlorophyll A-B binding protein 63 170 IPR022796 -
Vimu9g00810 189 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 182 IPR001344 GO:0009765|GO:0016020
Vimu9g00810 189 SUPERFAMILY Chlorophyll a-b binding protein 49 176 - -
Vimu9g00810 189 Gene3D Chlorophyll a/b binding protein domain 55 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00810 Vimu-Chr9 12622877 12623446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00810 14 172 Chloroplast and Mitochondria Gene Families AT3G08940 79.375 6.89e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00810 K08915 - gmx:100785180 305.064