Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00798 ATGGAGGTGATGGAGAATGGTGATGCAAACATGAAGGGGTTGTTGAACAAGGAGATGAGACATGGAAGAACAGCACATAACATGTCGTCTTCTTCACTGCGCAAAAAATCTGACCTAACTCTTGTGTCTAAGATTAATTTTGGTCCTCTAAAAGACATGTTGGTGAACATTCAAGAGGTTGTTTTGGGAACCAAACTGTCTATTCTCTTACCAGCTGTTCCAATTGCCATTGTTGCTCAATGCTATGGATTTGGAAGATCTTGGGTTTTTGCATTGAGTTTATTGGGGCTTACCCCACTTGCTGAAAGACTCAGTTTCTTGACAGAACAAATTGCTTGCTACACTGGTCCCACAGTGGGAGGACTTATGAATGCAACATGTGGGAATAGTACAGAGCTCATTATAGCAATTTTTGCCCTTAGCCGTAATAACATTGCTTTGGTCAAATATTCTCTTCTGGGTTCTGTAATTTCTAATCTTCTTCTGGTTCTTGGAACCTCTCTATTATGTGGAGGCCTTGTAAACCTTAGAGAGGAACAGAAATATGATAGAAGAAAAGCAGATATGAACTTGCTTATGCTGTTTGTGGCATTGCATTGTCACTTGCTGCCAATGCTGTTCTATTATGCCGGTGTCTCAGAAGGAGTCAGTGCAGAATCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTATTATGGTGATAGCATATTTTGCCTACCTTGTGTTCCAGCTTTGGACTCACAGACAACTATTTGAAGACCAGGATCAAAATGAAGAAGAGGGTGACACTGATTCAGATGAAGCAGTGATAGGATTCTGGAGTGGATGTGTTTGGCTGGTCGGGATCACTGTGATCATTGCAGTGCTTTCTGAATATGTGGTGGAAACAATTGAGGATGCATCTAATTCATGGGGTTTGTCTGTTAGTTTCCTCAGCATAATCTTGCTTCCAATAGTTGGTAATGCAGCAGAACATGCTGGAGCAATCATATTTGCTTTCAAGAACAAACTGAACATTTCTTTGGGTGTTTGTCTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGATGGAACTTCTCACTACATGAAAGGCCTTGTGCTATTTCTGTGCTACATTATCATAGGGGCATGCTTTTTCGTACAAAGAACACCCTCTAACCAAATTAGTGCTTCCAGCATAATGCTCAAATCAAAAAGGGAAGCAGTTTTCAGAGCTTAA 1218 0.4097 MEVMENGDANMKGLLNKEMRHGRTAHNMSSSSLRKKSDLTLVSKINFGPLKDMLVNIQEVVLGTKLSILLPAVPIAIVAQCYGFGRSWVFALSLLGLTPLAERLSFLTEQIACYTGPTVGGLMNATCGNSTELIIAIFALSRNNIALVKYSLLGSVISNLLLVLGTSLLCGGLVNLREEQKYDRRKADMNLLMLFVALHCHLLPMLFYYAGVSEGVSAESSLQLSRAASIIMVIAYFAYLVFQLWTHRQLFEDQDQNEEEGDTDSDEAVIGFWSGCVWLVGITVIIAVLSEYVVETIEDASNSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLNISLGVCLGSATQISMFVDGTSHYMKGLVLFLCYIIIGACFFVQRTPSNQISASSIMLKSKREAVFRA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00798 405 NCBIfam calcium/proton exchanger 51 355 - -
Vimu9g00798 405 Gene3D - 117 259 IPR044880 -
Vimu9g00798 405 Gene3D - 262 396 IPR044880 -
Vimu9g00798 405 NCBIfam calcium/proton exchanger 69 355 IPR004798 GO:0006816|GO:0015369
Vimu9g00798 405 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 20 355 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vimu9g00798 405 Pfam Sodium/calcium exchanger protein 88 245 IPR004837 GO:0016020|GO:0055085
Vimu9g00798 405 Pfam Sodium/calcium exchanger protein 277 364 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00798 Vimu-Chr9 12432611 12436953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00798 3 388 Antiporters AT2G38170 58.469 3.01e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00798 K07300 - gmx:100782052 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04467 6 50197360 50200116 Vimu9g00798 9 12432611 12436953 PCT