Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00771 ATGGAGGGTCATCATCTCCATCGCCACCATGGGCAACAACAACAGCAACAAAGGCTTCAGAATACGAGTGCCAACGTTGATGCCACTGATAGGTTTCCCCAATGGAGTATCCAAGAGACTAAGGAGTTTCTCGTGATTCGTGCAGAGCTTGATCAGACTTTCATGGAGACTAAGCGGAACAAGCAGTTGTGGGAAGTGATCTCAACGAGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACTCGCTACAAGGGGTTTGAAACAATGGAGCAAGAAGCGACGAGGCAGCAATTTCCATTTTACAATGAATTCAGTGCGATTTTCACGGCAAGGATGCAGAGAATGCTGTGGGCTGAAGCTGAGGGTGGGTCGAAGAAGAACAAGGGGACGCAGCTCTCATCGGATGAGGAAGAAGATGGTAATGAAGAGAGTGCAGAAGGTGGTGGAGGAAGAAAGAAGAAAAAAGCAAAGATAGCTAGTGGGGGTGGTGGTGGTAGCAGTTTGAACAGTTTGAAGGAGATTTTGGAGGAGTTCATGAGGCAACAGATGCAGATAGAAGCACAATGGATGGAAGCATTTGAAGCAAGGGAAAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAAGTGTTGGAGAATGAGAGGATAATGATGGAAGAAAGATGGAGAGAAAGAGAGGAACAAAGGAGGATCAGAGAAGAAGCTAGGGCTGAGAAAAGGGATGCTCTAATCACAGCTTTGCTAAACAAGCTAGAGAGGCAAGAAATGTGA 813 0.4662 MEGHHLHRHHGQQQQQQRLQNTSANVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISTRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFSAIFTARMQRMLWAEAEGGSKKNKGTQLSSDEEEDGNEESAEGGGGRKKKKAKIASGGGGGSSLNSLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQEM 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00771 270 CDD GT1 33 96 - -
Vimu9g00771 270 FunFam Zinc finger and SCAN domain-containing 20 35 96 - -
Vimu9g00771 270 ProSiteProfiles Myb-like domain profile. 35 91 IPR001005 -
Vimu9g00771 270 MobiDBLite consensus disorder prediction 1 22 - -
Vimu9g00771 270 Gene3D - 35 96 - -
Vimu9g00771 270 Coils Coil 179 199 - -
Vimu9g00771 270 PANTHER FI21293P1 13 266 - -
Vimu9g00771 270 Pfam Myb/SANT-like DNA-binding domain 34 117 IPR044822 -
Vimu9g00771 270 MobiDBLite consensus disorder prediction 132 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00771 Vimu-Chr9 11863744 11865103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00771 21 267 Trihelix Transcription Factor Family AT5G01380 52.313 5.90e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vimu9g00771 Myb_DNA-bind_4 1.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00771 - - gmx:100818384 352.058