Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00744 ATGGGGTGTTTCACTGTTCTGAAATACAAGAAGGAAAAGATCAATAAAATCCGATACACAAAATGTGTGAGCCATATTGAACATGTTCCTACAGTACTTCCTGAACCTCAAACTCATACTCGTTCCTTGCATTCTGCACCTCCTAGTTTTAGGAATAGAGTGAAATCCACTTACCCCATTAATAAAGTCACCAATCACAGAACACGGACATTATCTGCTCCATCAGCTCTTGATGTGGCCACACAAAATACTCTTACCACAGTCGAGTTCGAGGATCAAGAGGAATCAAGATACAATGTTGGACCACTGAAGGGGCAGCATTCATCTAATCCACTACCTTTACCACTTCCTTCACACCAGGGTGGTGGTGAATTGAAAGCTACTGGAAGCTTTAAGTCAGGAATAGTTAGTGGTTCTGTGTATGGTCCTGATGTTGCAGAACAGGATGCTTTGGCCTCGGTTGAGTATGAGGAACAAGAAGAGTCAAAACACCGAGTTGGATTGGTGAAAGATCATTGTTCAACTAGTTCACAACCTTTGCCTCTTCCATCTCGTCAAGTTGGTGGTGCTGCATTGAAGGCTAAGATCAGCACTAAGTTGGGAATGGCTACTGCTCCTGTATATGTCTGCGGACCTTTGCCTCTTCCACCCACCGGGTTGCTTAGAAACTTACCGTTTGAGGAGATTGCTGCTGCTTGTCACAACTTCTCTTCAGATCGATGCATGTCTGAATGTCTTTCTTCTACCATATATAGCGCTTCATTTGGCGATGATGCTTCAAGTGCAAAAAAGTTTGAAGCCACTGTCACTCGCCTTCATTCATCAACACAGAGTCAACAGAAGATTGTTATGCCTTTTGAAAACCATTTTAAGAGGGGCATGAAAGAGTTTAGGTTTGTCAACTCCTGTCCTGTGGTTTATGAATTTTGGCCCAAGACAAAGTTTGAAAGCAGCTGGGAACATTCTGACATGGGATTGAAGGAATTCATAAATGATGTCAATACCCTTGCATCTTTGCAACATCCAAACCTCTGCAAATTGCTAGGATTTCATGCCCGTGATGGTTCTGAACCAAGGATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCAACAGTTGTTTGGGAGATCTGATGGCCATTCAATTGATTGGAACTCACGAATGAAAGTTGCCATATGCGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGACCACATTAAATGCTGTTGGACTCAAGCTATTTCTTAATATTGGAGCAATGTATAATGAATTTTCAGCAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCTGGGTATGGTTGTGTGGGACGAATTCCTGAGGAAGAGATTTCCAGCAGTACATGTTATTCCATAAGTTTTGTTCTCATTCATTTGGTTCTTGAATTTATTATTGTACAGGCTGTTGGAAACCTGTCTGTGGAGACACTGGAAAGAGGAATTCTTACTCCAAAGAGCTATGTTTGGGGTTTTGGAATTATTCTTTTGGAGCTACTAACTGGCAGAAAGAATGTGGATAGTCATCACCCCAAGGAAGAGAGGAACTTGGTGAAGTGGAGCCGGCCTTTCCTGGCTGATGATTTTCGACTGTCGTTGATTATGGATCCTCAACTTAAAGGTCGGTATCCTCCCAAGGCAGCAAGAGCAGTAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCTCCCATGAGAACCATTGTAGAGCATCTTAAAGTGGTTCAAGATATGAAGTACACATGTTGGTTCCCACTGCAAGAGCCAGCAAAACAAATGTCAAGATCACCTAGTCTTAATGGTGTCAAATGTCTTACTCCTACACTGAGTTTCTCTCCCTCAACAGCACCAGTTACCAGACCATCTGTTTCATCTCCAAGATGGTGTGCTGTGCCCACACTGCATCTTCCTCTTGGCGCTTGTTCTTCCACTTTCTCCATGGATGACCATGTTAGGCCGGAAAGCCGGAAGTCAATCCTCAATGTGTAG 2046 0.4326 MGCFTVLKYKKEKINKIRYTKCVSHIEHVPTVLPEPQTHTRSLHSAPPSFRNRVKSTYPINKVTNHRTRTLSAPSALDVATQNTLTTVEFEDQEESRYNVGPLKGQHSSNPLPLPLPSHQGGGELKATGSFKSGIVSGSVYGPDVAEQDALASVEYEEQEESKHRVGLVKDHCSTSSQPLPLPSRQVGGAALKAKISTKLGMATAPVYVCGPLPLPPTGLLRNLPFEEIAAACHNFSSDRCMSECLSSTIYSASFGDDASSAKKFEATVTRLHSSTQSQQKIVMPFENHFKRGMKEFRFVNSCPVVYEFWPKTKFESSWEHSDMGLKEFINDVNTLASLQHPNLCKLLGFHARDGSEPRMLVYERLYHGSLDQQLFGRSDGHSIDWNSRMKVAICAAQGLTFLHEEGPFQTTLNAVGLKLFLNIGAMYNEFSAANIQIDKDFSAKLSGYGCVGRIPEEEISSSTCYSISFVLIHLVLEFIIVQAVGNLSVETLERGILTPKSYVWGFGIILLELLTGRKNVDSHHPKEERNLVKWSRPFLADDFRLSLIMDPQLKGRYPPKAARAVADIAQRCLQKEPSERPPMRTIVEHLKVVQDMKYTCWFPLQEPAKQMSRSPSLNGVKCLTPTLSFSPSTAPVTRPSVSSPRWCAVPTLHLPLGACSSTFSMDDHVRPESRKSILNV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00744 681 SUPERFAMILY Protein kinase-like (PK-like) 322 605 IPR011009 -
Vimu9g00744 681 MobiDBLite consensus disorder prediction 88 127 - -
Vimu9g00744 681 ProSiteProfiles Protein kinase domain profile. 244 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00744 681 Gene3D Phosphorylase Kinase; domain 1 313 364 - -
Vimu9g00744 681 Gene3D Transferase(Phosphotransferase) domain 1 366 602 - -
Vimu9g00744 681 Pfam Protein kinase domain 325 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00744 681 PANTHER OS01G0588500 PROTEIN-RELATED 172 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00744 Vimu-Chr9 11540335 11543005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00744 325 595 Receptor kinase-like Gene Family AT4G02010 34.926 6.31e-42 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Vimu9g00744 Pkinase 2.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00744 - - aprc:113849641 836.639