Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00733 AAAATCGAGGGCCAAGACGAAGCTGTGCAAAATCGTTTGGCTCTACAAACTGCTAAAGCCATTGACACGTTTCACTCCTCGACCCCTCCTGTGATTCACTGTGAGATAAAGTCTGCGAACGTTCTCATTGACCGCAACTACAATGCGAGATTGAGGGATTTTGGTTTGGCCTTGAGAGGCCATGTTGATGACTACAAACTCAGGTCTACTCCCCCTGCAGGCACCATGGGCTATCTTGATCCTTGTTATGTAACTCCTGATAATTTGAGCACCAAAACTGATGTTTTCAGCTTTGGGATTTTGCTGCTGGAGATTATAAGCGAAAGGAAGGCCATTGACATCACTTATTCACCACCTTTTATCGTGGATTGGGCTATTCCTCTCATCAAGAAAGGGAAGCTTTTGGCTGTTTATGATCCTAGAATTGCAGCTCCCAAGGATCCGATTGTGAGGAAGCAGTTGACTGTGATTGCTGCCAAGTGTGTGAGGTCTTGCAGGGAGAGGAGACCTTCCATGAAGGATGTTGTTACTTGGCTCTGTGGGCTGTGTAAACTGGTGCCTCTTCATTCTTGGAGTGGTTTTAACAACCCTTGCATGATGGTTGAGACTGTGGGGTGCCCCGTCGAAGCAAGAAATGGTGAATTCAATTCTAGACTGGCAGGTGTGGAAGAGGGAAATATTGAAGCTTTGGATGGAAGACTTTCCAAATCTGCAATGAGGTATTCCCGGAGGGTGTATTCTGATTTGGAGGTATTCCCGGAGGGTGTATTATACAAAAGAACACTCATTCAACTTAATACATAA 804 0.454 KIEGQDEAVQNRLALQTAKAIDTFHSSTPPVIHCEIKSANVLIDRNYNARLRDFGLALRGHVDDYKLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISERKAIDITYSPPFIVDWAIPLIKKGKLLAVYDPRIAAPKDPIVRKQLTVIAAKCVRSCRERRPSMKDVVTWLCGLCKLVPLHSWSGFNNPCMMVETVGCPVEARNGEFNSRLAGVEEGNIEALDGRLSKSAMRYSRRVYSDLEVFPEGVLYKRTLIQLNT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00733 267 Pfam Protein kinase domain 8 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00733 267 PANTHER OS01G0253100 PROTEIN 12 181 - -
Vimu9g00733 267 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00733 267 SUPERFAMILY Protein kinase-like (PK-like) 6 191 IPR011009 -
Vimu9g00733 267 Gene3D Transferase(Phosphotransferase) domain 1 5 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00733 Vimu-Chr9 11249629 11250432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00733 2 179 Receptor kinase-like Gene Family AT3G59420 46.524 4.29e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vimu9g00733 Pkinase 4.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00733 - - vra:106779889 483.026