LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu9g00701	ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCGGCCTCAGATTCATTTTCACTGCTTTTGCATCATCCACAACCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGATTCCAGAAGAAGCCCAAGCCCTCCCACTTCCTCCTCTACAATGTCCTCTTCTCTTGGCAGCAACAGCACCAGCAAGGGTTGCAGTGGCACTTCAGCCACCACCACCACCACCACTGGTGCTGCAGCCCCTACGCCCTCTGACAACAACAACCCTCCTCCGGATTCCAGCCCTGAAAAATGTGGCATCAGGATGGATGACTGGGAGGGTCAAGATCAATCCATTCTCAGGCTAATCATGGGGGATGTTGAAGACCCTTCTGCTGGATTGAGCAAGCTCTTGCAAAGCACTGCCTGTGGTTCTCAAAGTGTTGATTTCAATGCAGGCTTTGGTGTTGTGGATCAAGGGTTGAATATGGTGAGTGGTGCTATTGACCCTTCTGGGAATTACCCCGCTGGTTTCCCTTTCATTGCTGAGAATATTGATGCCGACAATGGCAAGCCTGGTTCTGTGGCTGGCCAGGTTTCAGAAACTGTTGTTTTCTCTGCCAATAATCCTCTTATTCTGTCATCATCTGTTTCTCCTGGTGTGTTCACTTCTCAGCAGCAGCATGAGTTTGGAGTGGTGGACGAGAAGCCTCAGGTTATCAACCCCCAGTTTATGTTAAACCAGAACCAAGTTCAGTTCTCAGAGAACCCTTCTTTCTTTGTGCCATTGATGTATCCCCAGGTTCAGGAGCAGCAGGTTTTCCCTCAGCATCAAGCAAAACGCCCTCTCTTTGAGACAATTGGGCACAATTATCAGGCTCCAAGGTTGGCCCTTTTGGATTCGGGGCAAGAGGTGTTTGGCAGGAGGCAGCAAACACAGCTTCCATTATTTCCTCACCATATTCAACAACAGCAACAACATCAATCAATTGTTATGCCATCTGCTAAACAGCAGAAGGTGAGTTCCGCCGGAGACGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATGCTCACTCTTTCATGGCTTTCTCACCAATCAGTTTCATATTCAAAATTGGAGCTTACAAGTCCTTTTCTGAGATATCACCTGTTCTTCAGTTTGCGAACTTTACTTGTAACCAAGCCCTTATTGAAGCTGTAGAAAGGTTCGACCGAATTCATGTCATTGATTTTGATATTGGGTTTGGAGTGCAGTGGTCATCTTTCATGCAAGAAATTGCCTTGAGAAGCAGTGCTGCACCTTCCCTCAAAGTCACTGCCATTGTGTCACCCTCCACTTGTGATGAGGTTGAACTCAATTTTACTAAAGAAAATTTGATGCACTACGCGAAGGACATCAACGTGTCTTTTGAGTTCAGTGTTCTGAACATTGAATCTTTGCACTATCCTTCTCCACTGCTTGGCCAATTCTTTGACAATGAGGCTATTGCAGTGAACATGCCAGTTTCAAGTTTCATAAACAATCCATCACTGTTCCCTTCAGCTCTTCACTTTGTAAAGCAGCTCAGGCCAAAGGTTGTGGTCACATTGGATAGAATTTGTGATCGAATTGACGTTTCACTTCCCACAAATACAGTCCACGTTCTTCAATGTTATTCAGCCTTGCTGGACTCTCTGGACGCTGTGAATGTGAATCTTGATGTTCTTCAAAAGATTGAGAGGCATTTCATTCAACCAGCCATCAAGAAAATCATTCTTGGCCACCACCATTCTCAAGAGAAACTCCCTCCATGGAGGAACCTCTTTCTACAATCTGGATTTTCTCCATTCACATTCAGCAACTTCACTGAAGCTCAAGCTGAGTGTTTAGTTCAGAGGGCACCTGTGAGGGGATTTCACGTGGAAAGAAAGCCTTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTCATCTCAGTTTCTACTTGGAGATGCTGA	2175	0.4602	MKAMPLPFEEFQGKGVLDFSSASDSFSLLLHHPQPKWTIDKEDYCYVGSTEPTSVLDSRRSPSPPTSSSTMSSSLGSNSTSKGCSGTSATTTTTTGAAAPTPSDNNNPPPDSSPEKCGIRMDDWEGQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSVDFNAGFGVVDQGLNMVSGAIDPSGNYPAGFPFIAENIDADNGKPGSVAGQVSETVVFSANNPLILSSSVSPGVFTSQQQHEFGVVDEKPQVINPQFMLNQNQVQFSENPSFFVPLMYPQVQEQQVFPQHQAKRPLFETIGHNYQAPRLALLDSGQEVFGRRQQTQLPLFPHHIQQQQQHQSIVMPSAKQQKVSSAGDDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNAHSFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHVIDFDIGFGVQWSSFMQEIALRSSAAPSLKVTAIVSPSTCDEVELNFTKENLMHYAKDINVSFEFSVLNIESLHYPSPLLGQFFDNEAIAVNMPVSSFINNPSLFPSALHFVKQLRPKVVVTLDRICDRIDVSLPTNTVHVLQCYSALLDSLDAVNVNLDVLQKIERHFIQPAIKKIILGHHHSQEKLPPWRNLFLQSGFSPFTFSNFTEAQAECLVQRAPVRGFHVERKPSSLVLCWQRKELISVSTWRC	724

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu9g00701	724	Pfam	GRAS domain family	369	723	IPR005202	-
	Vimu9g00701	724	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	339	719	IPR005202	-
	Vimu9g00701	724	MobiDBLite	consensus disorder prediction	51	121	-	-
	Vimu9g00701	724	MobiDBLite	consensus disorder prediction	51	102	-	-
	Vimu9g00701	724	ProSiteProfiles	GRAS family profile.	358	723	IPR005202	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu9g00701	Vimu-Chr9	10104993	10107167	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu9g00701	366	724	GRAS Transcription Factor Family	AT4G00150	54.521	4.26e-126	385

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Vimu9g00701		GRAS	7.7e-90	CL0063

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu9g00701	-		-	gmx:100801785	1170.61