Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00700 ATGAAGGCGATGACCTTTCCTTTTGAGGAGTTTCAAGGGAAGGGAGTGTTGGATTTTTCTTCAGGCTCAGATTCATTTTCATTGCTTTTGCATCATCCACAAGCAAAGTGGACCATAGACAAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGATTCCAGAAGAAGCCCAAACTCTTCCACCATGTCCTCTTCCCTTGGCAGCAGCAACACCATCAGCAAGGGTGGCAGTGGTGGTTCAACCAATAACACCACTTGTTACACCCCAATCCTTTCTCAGAACCCTCCTCAGACAGCATTGGAAACTAGCACAGAAAAATGTGGAGTGAGAATGGAGGATTGGGAGAGTCAAGATCAATCCATTCTGAGACTAATCATGGCAGATGCCGAAGACCCTTCTGTAGGTTTGAGCAAGCTCTTCCAGGGCAGTGGCTGTGGCTCTCAGCAAACCGTTGATTTCAATGCAGGTTTTGGTGTTGTGGATCAAGGGTTGAATATGGTAAGTATTGTTGATCCTTCAGGGAATTACCCTGGTTTCCCTTTTATTGCTGAGAATATAGATGGCCATAATGGTAATAAGACTGGTTCTTTGTCTGTTGGAGAATCCATGTTTTCTGTTTCTGGTAACAATTCTCTGTTGTTCTCAACATCTCCTGGTGGGTTTAACTCTCAGCAGCAAGTGATTGGAGAGGTGGATGAGAAGCCTCAAGTCATTAATCCCCAGTTTGAGTTAAACCAGACTCAAGTTCAATTCTCTGAGAACCCATCTTTCTTTGTGCCAATGATGTACCCCCAATTGCAAGAACAGCAAGTTTTCTCTCAGCATCCAGCAAAGCGCCCTGTTTTTGAGCCTGCTGGGTACAGTTATCAGGCTCCAAGGTTGCCCCTTTTGGATTCTGGGCAAGAGATGTTTGGCAGGAGGCAACAAACACAGCTTCCATTGTTTCCTCATCACATGCCACCACAGATTGTGCCATCTGCTAAACCGCAGAAGGCTAGTTCCACCGGAGAAGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGACCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGGAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAGGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGTTGTCTCTGCTTCATTCAAATCCTCACAATGTCTTGGCTTTCTCACCCATCACTTCCATTTTCAAAATCGGAGCATACAAGTCTTTTTCTGAGATATCACCTATCATTCAGTTTGCCAACTTCACCAGTAACCAAGCCATCATTGAAGCCTTGGAAAGGTTTGATCGTATTCACATTATCGATTTTGATATTGGGTTTGGAGTGCAATGGTCTTCTTTCATGCAAGCACTTGCCATGAGGACTAATGGTGTGCCTTCCCTCAAAATCACAGCCATTGTGTCACCCCTCTCTTATGATGAGTTCGAGCTCAATGTGACTCAAGAAAAGTTAAACCAATACGCCAAAGACATCAACATGTCTTTTGAGCTCAATGTCTTAAGCATTGAGTCATTGAGCTCTCCTTCATGTCCACTCTCTGTTCAGTACTATGATAATGAAGCAACTGCTGTGAACATGCCACTTTCCTGTTTCACAAACTACCCTACATTGTTTCCCTTAGTCCTTCGCTTTCTGAAGCAGCTTAGGCCAAAAGTGGTAGTCACTCTTGATAGAAATTGTGACCAATTGGATGCACCATTTTCCACCAATATAGTCCATGCTCTTCATTGTTACTCAGCCTTACTTGAATCACTTGATGCTGTGAATGTCAACCTCGATGTCCTCCAAAAGATTGAAAAGCATTTCATTTTACCATCCCTTAAGAAAACCATAACATGTCCCCTTCGTTCACAAGAAAAACTTCCTACTTGGAGGAACATGTTTCTTCAATATGGTTTCTCTCCATTCACATTTAGCAACTTCACAGAAGCTCAAGCTGAGTGCTTGGTGCAGAAGGCACCTGTTAGGGGATTCCAATTGGAGAGAAAGCACTCATCTCTTGTTCTTTGCTGGCAGAGGAAAGAACTCATCACAGTTTCAACTTGGAGATGCTGA 2133 0.4435 MKAMTFPFEEFQGKGVLDFSSGSDSFSLLLHHPQAKWTIDKEDYCYVGSTEPTSVLDSRRSPNSSTMSSSLGSSNTISKGGSGGSTNNTTCYTPILSQNPPQTALETSTEKCGVRMEDWESQDQSILRLIMADAEDPSVGLSKLFQGSGCGSQQTVDFNAGFGVVDQGLNMVSIVDPSGNYPGFPFIAENIDGHNGNKTGSLSVGESMFSVSGNNSLLFSTSPGGFNSQQQVIGEVDEKPQVINPQFELNQTQVQFSENPSFFVPMMYPQLQEQQVFSQHPAKRPVFEPAGYSYQAPRLPLLDSGQEMFGRRQQTQLPLFPHHMPPQIVPSAKPQKASSTGEDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGRPFQRAAFYMKEALLSLLHSNPHNVLAFSPITSIFKIGAYKSFSEISPIIQFANFTSNQAIIEALERFDRIHIIDFDIGFGVQWSSFMQALAMRTNGVPSLKITAIVSPLSYDEFELNVTQEKLNQYAKDINMSFELNVLSIESLSSPSCPLSVQYYDNEATAVNMPLSCFTNYPTLFPLVLRFLKQLRPKVVVTLDRNCDQLDAPFSTNIVHALHCYSALLESLDAVNVNLDVLQKIEKHFILPSLKKTITCPLRSQEKLPTWRNMFLQYGFSPFTFSNFTEAQAECLVQKAPVRGFQLERKHSSLVLCWQRKELITVSTWRC 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00700 710 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 326 705 IPR005202 -
Vimu9g00700 710 MobiDBLite consensus disorder prediction 52 104 - -
Vimu9g00700 710 Pfam GRAS domain family 354 709 IPR005202 -
Vimu9g00700 710 ProSiteProfiles GRAS family profile. 343 709 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00700 Vimu-Chr9 9967057 9969189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00700 351 710 GRAS Transcription Factor Family AT4G00150 54.545 2.37e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu9g00700 GRAS 3.9e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00700 - - pvu:PHAVU_010G072700g 1104.74