Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00696 ATGCAGGGGAAATGTGTCTTCTTTGTGTTTGTGAGCGAGTGTGCTGGTTGTGGTGTGATTTGGTCCAATTTTCTGCATTTTTTGAAACCAGTATCCAAATTATATTTCAAAAAGTTATATGTTGTTGATGCACGACCAAGAAAAAATGCCTTGGCTAATGGAGCCATGGGAGGTGGTTTAGAATTATCATCAAACTATTTTCAATCCATAGTCTTGTTGGGGATAGACAACATCCATGCGAAGAGACAAATTTGTTCGGCTTTGAAAATACATGGACACTCATGGCAAAGCATCATCAGATGGACTGTCCTCTTTCTTGGTTAG 324 0.392 MQGKCVFFVFVSECAGCGVIWSNFLHFLKPVSKLYFKKLYVVDARPRKNALANGAMGGGLELSSNYFQSIVLLGIDNIHAKRQICSALKIHGHSWQSIIRWTVLFLG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00696 107 Pfam Myotubularin-like phosphatase domain 37 88 IPR010569 -
Vimu9g00696 107 ProSiteProfiles Myotubularin phosphatase domain. 1 107 IPR010569 -
Vimu9g00696 107 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 87 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00696 Vimu-Chr9 9760876 9761309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00696 30 92 Protein tyrosine phosphatase (PTP) family AT3G10550 64.706 3.85e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00696 K18081 - vum:124824561 142.895