Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00648 ATGTCAACTTTTAACTTGTTCATCACACTCTTAGTTTCTTTCTTACTTTCTTCTTTCGTTTCTAGTTATTCTGGGAATGATGTTCAACTTTGGTGCAACCAAACCCCAAATCCTCAACCATGTGAGTATTTCTTGACCAACAGCCCCACTCACCAATACAAACAAATCAACCAAAAATCTGATTTCCTCCAACTTTCACTTCAACTTGTTCAAGAACGTGCACTTATAGCCCATGCAAACACTCTTTCACTGGCTTCAAAATGCCGTAATCCACGTGAAACAGTTGCATGGACTGACTGTGTTGAACTTTATGAACAAACCATCCTTAAACTCAACAAAACCTTAGACCCTAACACCAAGAGCTCCCATGTTGATACTCAAACATGGCTCAGCACAGCTCTCACTAACCTTGAGACATGCAAAGCTGGGTTCTACGAGCTTGGGGTTCAAGACTATGTTCTCTCTTTCATGTCCAACAATGTTACCCAGTTGTTGAGCAACACTTTGGCTCTTAATAAGGTTGACTATGAAGAACCAAGTTACAAAGATGGGTTTCCAACATGGGTGAAGCCAGGTGACAGGAAATTGTTGCAAGCTTCTTCTCCAACTTCTAAGGCCAACGTAGTGGTGTCAAAAGATGGTTCTGGAAAGTACACAACAGTGAGTGCAGCCATCAATGCTGCACCAGTGATTAGCAGCGGAAGGTATGTAATATACGTGAAGGGTGGAGAGTACAATGAACAAAACGACTTCACAAGAAGAAGTCGTGCCCCCCCTGCACGACTTCACACTGTTCACATGAACAGTAGTGAAGTCACCCCTTGTAATCGATTACCAGGTGATTTTGAAGTGGTAACAGCCCCTGTAATCGCTTACTGGGGTGTCCAATGA 891 0.4287 MSTFNLFITLLVSFLLSSFVSSYSGNDVQLWCNQTPNPQPCEYFLTNSPTHQYKQINQKSDFLQLSLQLVQERALIAHANTLSLASKCRNPRETVAWTDCVELYEQTILKLNKTLDPNTKSSHVDTQTWLSTALTNLETCKAGFYELGVQDYVLSFMSNNVTQLLSNTLALNKVDYEEPSYKDGFPTWVKPGDRKLLQASSPTSKANVVVSKDGSGKYTTVSAAINAAPVISSGRYVIYVKGGEYNEQNDFTRRSRAPPARLHTVHMNSSEVTPCNRLPGDFEVVTAPVIAYWGVQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00648 296 SMART PMEI_2 23 171 IPR006501 GO:0004857
Vimu9g00648 296 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 174 IPR035513 -
Vimu9g00648 296 CDD PMEI-like_3 30 173 - -
Vimu9g00648 296 PANTHER PECTINESTERASE 15 252 - -
Vimu9g00648 296 Gene3D - 201 260 IPR012334 -
Vimu9g00648 296 Pfam Pectinesterase 207 251 IPR000070 GO:0030599|GO:0042545
Vimu9g00648 296 Pfam Plant invertase/pectin methylesterase inhibitor 27 171 IPR006501 GO:0004857
Vimu9g00648 296 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 174 IPR035513 -
Vimu9g00648 296 NCBIfam pectinesterase inhibitor domain 8 173 IPR006501 GO:0004857
Vimu9g00648 296 SUPERFAMILY Pectin lyase-like 201 254 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00648 Vimu-Chr9 8030606 8031731 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00648 1 254 Carbohydrate Esterase AT2G45220 53.307 3.59e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00648 K01051 - gmx:100781697 410.994