Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00638 ATGACCACAAACCTCCTGCCATTCCCACACATGAATAACGTTTCTCCACATGAGAAAGCGTCATCACGAAATATCAGGATCAGAACGACAACAGAGTCTGACCATGTTCATACTTTACCAATCAACATCAATCATGAGACGTTCCTCCGTGGAATTCTCTTACTTAATCAATGTGAGACAAGGATGAGGTTATCTTCAATAGGTCGAGTGCCAGTACAGGACCAAACACACTTTAGGAAACAAGTGCTTGAAGAGTGCGTGCGTGTAAGAAGACCAAGAAGCTTCGAAAGTCAGAAATACTTATCGGAATCTAGAGAGAAGTTGGAAGGGTGTAGAGAGAAGGAGGAGAAATTGAGTTTTCTGAAAGTTGAAGATGAAGAGCTGACAGCTTTGTCTTCCACTACCAAGGAGAAACTGGAAAGGGTGCTACACGTGGCATCCACTAAGGGCTTGGCCGACCGAACGAACTCCTACTGTAGGTTAAAGACAGAGTCGTGTGCATATGGCGCCAAGGCGTGTCGCGAAAAAATGCGAAGGGATAAACTGAATGATAGGCATGTTATTACCTTGCGTCTTATGCCACCCAAAACAGACAAAGTTGCAATATTAAGTGATGATGCTCGAGTGGTATTCTAA 636 0.4387 MTTNLLPFPHMNNVSPHEKASSRNIRIRTTTESDHVHTLPININHETFLRGILLLNQCETRMRLSSIGRVPVQDQTHFRKQVLEECVRVRRPRSFESQKYLSESREKLEGCREKEEKLSFLKVEDEELTALSSTTKEKLERVLHVASTKGLADRTNSYCRLKTESCAYGAKACREKMRRDKLNDRHVITLRLMPPKTDKVAILSDDARVVF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00638 211 PANTHER BHLH TRANSCRIPTION FACTOR 149 210 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Vimu9g00638 211 MobiDBLite consensus disorder prediction 1 23 - -
Vimu9g00638 211 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00638 Vimu-Chr9 7868168 7870400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00638 160 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51070 55.357 4.14e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00638 - - aip:107613798 67.781