Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00632 ATGGCACAACTCAACCTCACATTTTTTCTTGTGATCTTCCTCTCTTTCTCCTTCTCATTTCTTGCCACCCCAGTTGAGCCATCATCATTGACAAGGCACAGAAACCCTAAAACAATGACCTACATAGAGTCCTCTTGCAAAGGCACCCTCTACCCTAATCTCTGCATCCGTTGTCTTTCCCAATATGCCAAATCCCCCTTAAATGGCCCACAACACTTGGCTCAACATGCCTTATCAGTGAGCCTCTCTAGGGCACTGCACACAAAAGGGTACCTTCTGAAAGTGGCAAAGGAGCTTCAAGCCATGAAGAGCAACAAAAAAGAGTACCTAACAGTGCAAGACTGTGTGAACCAAATCAGTGATAGTGTGGAACAAATTAGCCAAGCCATGAAAGAACTGCGTAGCTTCAACAAACATGATTCAAGCATGAATGATAACATGTTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACAGCTTTGACAGATGCCAGTAGTTGTGTGTACTCATTTCCTGGGAATAGAATGAGTATGAGAGTTGCTGCTATTAAGGTTAAGGCTAAGAATGTTGCAGAAGTTACAAGTAATGCTCTTTTCTTGTTCCATAGATATGCATCTACATACCAGAAAGCCACAATGAACACCAGTAATTCCTAA 660 0.4273 MAQLNLTFFLVIFLSFSFSFLATPVEPSSLTRHRNPKTMTYIESSCKGTLYPNLCIRCLSQYAKSPLNGPQHLAQHALSVSLSRALHTKGYLLKVAKELQAMKSNKKEYLTVQDCVNQISDSVEQISQAMKELRSFNKHDSSMNDNMLWHISNVETWVSTALTDASSCVYSFPGNRMSMRVAAIKVKAKNVAEVTSNALFLFHRYASTYQKATMNTSNS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00632 219 CDD PMEI-like_3 44 207 - -
Vimu9g00632 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 205 IPR035513 -
Vimu9g00632 219 SMART PMEI_2 37 201 IPR006501 GO:0004857
Vimu9g00632 219 FunFam Pectinesterase inhibitor 3 37 206 - -
Vimu9g00632 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 200 - -
Vimu9g00632 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 205 IPR035513 -
Vimu9g00632 219 NCBIfam pectinesterase inhibitor domain 12 204 IPR006501 GO:0004857
Vimu9g00632 219 Pfam Plant invertase/pectin methylesterase inhibitor 41 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00632 Vimu-Chr9 7833196 7833855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00632 32 218 Carbohydrate Esterase AT3G14310 21.244 3.81e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00632 - - gmx:100791798 328.176