LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu9g00625	ATGGAAGCGTTATCTGAGTTATTGTTACTTCTCAGCTCTCACCCCTCTTATATATTGTATGTAAGCTGGATCAAGGGCTCCCAGATAACCACGGCAGAATATATGGATCAGCTGCATATGATTAATTTTGAACAGCGATGGAAAAAGGCAACTAAGTGGAAAGATCCTTCCGTTACCACTTCAAAGGATAATTTTTCAGTTGTTCCAGAAGTTGACCCTTTAGTATGGGTTTGTAGTGAAGATGATCCTGAAAACTGGCATGTTCACGTTGGGCAATGCAAGTTTATCTTCCGCTCCATTGACTCGGGGTTCCTCAAAGGATTTTCCAAACATGTTGATGTTCCTCTGTCCCAGCGTACATTCAAGCGATCAGATCTGCCCAACACTTTATTTATATTGGAAACCAATACTTCATTCGATCATCATATGCATGGCCATAAAGATGAAGGGGCTGGTAATCTCATCCCAATGTTGTTGGCACTGAAAATTACTAGTAAAATCAGAGCTGAGGAAAGATTTGCTGTCTATGTTGTTTCATCAATGTGGCCAGGAGGCGATCCTAAAACTGGGGCTATGCAAGAAATCCTCTTTTGGCAGGTATCAGATTGTATGAATTCTTTGGAAGTTTATTTTCAGATGGTGGAAATATACAATTAA	657	0.4018	MEALSELLLLLSSHPSYILYVSWIKGSQITTAEYMDQLHMINFEQRWKKATKWKDPSVTTSKDNFSVVPEVDPLVWVCSEDDPENWHVHVGQCKFIFRSIDSGFLKGFSKHVDVPLSQRTFKRSDLPNTLFILETNTSFDHHMHGHKDEGAGNLIPMLLALKITSKIRAEERFAVYVVSSMWPGGDPKTGAMQEILFWQVSDCMNSLEVYFQMVEIYN	218

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu9g00625	218	PANTHER	PHOSPHOLIPASE D	138	206	IPR015679	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu9g00625	Vimu-Chr9	7719590	7721077	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu9g00625	40	199	Phospholipase D Gene Family (Wang group)	AT4G35790	43.902	1.12e-42	150

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu9g00625	K01115		-	gmx:100814486	166.392