Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00598 ATGAGAAAGAAGCCGAAGCAGCGCCCTGCACCGGTGGAAGATCCTTCAACTGCTTCCTTCTCCGAATCTGAGGAAGATGATGACCAACCGCACTCTTCTCAACAGCATGCAGCAGCAGCAGCAACACAGGTTTCTTCCTCTGAAGAGGAAGACTATTCTTCAGAAGAAGAAGAAGACGAGAAGCAACGTTCCACTCTCCCTGCTTCTGCAAACCATCCCTCCAAGCCTCACCCCAAGTCCTCCTCTGAATCCGAATCCGACACTGACTCCGAACCAGCCCGAGTCAAACCCAAACCCAAGCCCACGGATCTACCCCAGCCCCAGCCCAAGGTCCAGGCCCAGCGTTCCTCCACGCCGGTGAAGCTGGGATCCAAGCGCCTCGCCCACGCAACTGAGCCGACTGAGCCGAAACGCACGAAAAAGAAACCAGCTGAGGCTCCTACTCCTTCCGTTGCTAACGACCAAACGGAGGAGAACGGGACCGGCGGGCAAGCGAAGGTGTTGTTCCAGAGGATCTGGAGCGCAGAAGACGAGCTCTGCATTGTAAAGGGCATACTTGAGTTCATCTCAAAGAACGGACAAGAGCCATATTGGAATGTCGACGCTTTCCACAACTTCATTAAGAAGTCACTCCACGTGAAGGTTTCCAGCCATCAGCTGAAGGATAAGATTCGACGGCTGAAGAAGAAGTTCGAGACTTATGAGGCGAAAAAGAAGAAAGGAATTCTGCCTCGGTTGAGGTTTCACGACGGGGTCTTGTATGCACAGTCCAAAAAGATTTGGGGTGAATCGCCCAACGAACTGGTGGAAAAGTCCAAGCCTCTTGCGAAATACGTTACCAAGACTCAAACGAAGGAATCAGAAGTCAAGGCCAAAGTTCCGACTCAAAAGAAGGAATCAGAAGCCAAGGCCAAAGTTGCGGCGCAGCCATCAGTGTCTGAAAGTGGTGACGTTAGTTTCCTTTACAGCAATATTTCTTGTTTTAAAAAGCTGGATGAGGATGAGATGAAGAGAGGACTCACTTTGATTGAAGAATCCAAGAGGAAGGAATTAGAGAGAAAGTGGAAAGTGTTGCAATATTCTGAGATGGAACTACTTGTTAATCGCTCTCTGTTGATTGCGGAGCAGATTAAGTTGGTATATGAAGTCCTACAGTCATCCAACAATTAG 1170 0.4957 MRKKPKQRPAPVEDPSTASFSESEEDDDQPHSSQQHAAAAATQVSSSEEEDYSSEEEEDEKQRSTLPASANHPSKPHPKSSSESESDTDSEPARVKPKPKPTDLPQPQPKVQAQRSSTPVKLGSKRLAHATEPTEPKRTKKKPAEAPTPSVANDQTEENGTGGQAKVLFQRIWSAEDELCIVKGILEFISKNGQEPYWNVDAFHNFIKKSLHVKVSSHQLKDKIRRLKKKFETYEAKKKKGILPRLRFHDGVLYAQSKKIWGESPNELVEKSKPLAKYVTKTQTKESEVKAKVPTQKKESEAKAKVAAQPSVSESGDVSFLYSNISCFKKLDEDEMKRGLTLIEESKRKELERKWKVLQYSEMELLVNRSLLIAEQIKLVYEVLQSSNN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00598 389 MobiDBLite consensus disorder prediction 33 48 - -
Vimu9g00598 389 PANTHER BNAANNG10740D PROTEIN-RELATED 44 380 IPR007592 GO:0006355
Vimu9g00598 389 MobiDBLite consensus disorder prediction 107 121 - -
Vimu9g00598 389 MobiDBLite consensus disorder prediction 128 144 - -
Vimu9g00598 389 MobiDBLite consensus disorder prediction 1 162 - -
Vimu9g00598 389 MobiDBLite consensus disorder prediction 78 98 - -
Vimu9g00598 389 Pfam Protein of unknown function, DUF573 169 262 IPR007592 GO:0006355
Vimu9g00598 389 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00598 Vimu-Chr9 7275259 7276428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00598 30 375 GeBP Transcription Factor Family AT4G00390 27.195 1.02e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vimu9g00598 DUF573 4.6e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00598 - - vun:114182157 456.062