Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00597 ATGAGAAAGAAGCCGAAGCAGCGCCCTGCACCGGTGGAAGATCCTTCAACTGCTTCCTTCTCCGAATCTGAGAAAGATGATGACCAACCGCATTCTTCTCAACAGCATGCAGCAGCAGCACAGGTTTCTTCCTCTGAAGAGGAAGACTATTCTTCAGAAGAAGAAGAAGACGAGAAGCAACGTTCCACTCTCCCTGCTTCTGCAAACCATCCCTCCAAGCCTCACCCCAAGTCCTCCTCCTCTGAATCCGAATCTGACTCCGAACCAGCTCGAGCCAAACCCAAACCCAAGCCCACGGATCTACCCCAGCCCAAGGTCCAGGCCCAGCGTTCCTCCACGCCGGTGAAGCTGGGATCCAAGCGCCCCGCCCACGCAACTGAGTCGACTGAGCCGAAACGCACGAAAAAGAAACCAGCTGAGGCTCCTTCTCCTTCCGTTGCTAACGACAAAACGGAGGAGGACGGGACCGGTGGACAAGCGAAGGTGTTGTTCCAGAGGATCTGGAGCGCAGAAGACGAGCTCAGCATTCTAAAGGGCATACTTGAGTTCATCTCAAACACCGGACAAGAGCCTTATTGGAATATCGACGCCTTCCACAAATTCATTAAGAAGTCACTCCACGTGGAGGTTTCCAGCCATCAGCTGAAGGATAAGATTCGACGGTTGAAGAAGAAGTTCGAGACTTATGAGGCGAAAAAGAAGAAAGGAATTCTGCCTCGGTTGAGGTTTCACGACGGGGTCTTGTATGCACAATCCAAAAAGATTTGGGGTGAACGGCCCAACGAACTGGTGGAAAAGCCCAAGCCTCTTACGAAAACCAAGACTCAAAAGAAGGAATCAGAAGCCAAGGCTAAAGTTCCGACTCAAAAGAAGGAATCAGAAGCCAAGACTAAAGTTCCGGGGCAGCCATCAGCGTCTGAAAGTGGTGACGTTAGTTTGCTTTACAGGAATATTTCTTGTTTTAAAGAGCTGGATGAGGATGAGATGAAGAGAGGACTCACTTTGATTGAAGAATCCAAGAGGAAGGAATTAGAGAGAAGATGGAAAGTGTTGCAATATTCTGAGATGGAACTACTTGTTAATCGCTCTCTGCTGATTGGGGAGCAGATTAAGTTGATATCTGAAGCCCTACAGTCATCCAACAATTAG 1149 0.4917 MRKKPKQRPAPVEDPSTASFSESEKDDDQPHSSQQHAAAAQVSSSEEEDYSSEEEEDEKQRSTLPASANHPSKPHPKSSSSESESDSEPARAKPKPKPTDLPQPKVQAQRSSTPVKLGSKRPAHATESTEPKRTKKKPAEAPSPSVANDKTEEDGTGGQAKVLFQRIWSAEDELSILKGILEFISNTGQEPYWNIDAFHKFIKKSLHVEVSSHQLKDKIRRLKKKFETYEAKKKKGILPRLRFHDGVLYAQSKKIWGERPNELVEKPKPLTKTKTQKKESEAKAKVPTQKKESEAKTKVPGQPSASESGDVSLLYRNISCFKELDEDEMKRGLTLIEESKRKELERRWKVLQYSEMELLVNRSLLIGEQIKLISEALQSSNN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00597 382 MobiDBLite consensus disorder prediction 260 297 - -
Vimu9g00597 382 MobiDBLite consensus disorder prediction 260 308 - -
Vimu9g00597 382 Pfam Protein of unknown function, DUF573 164 257 IPR007592 GO:0006355
Vimu9g00597 382 Coils Coil 212 232 - -
Vimu9g00597 382 MobiDBLite consensus disorder prediction 1 157 - -
Vimu9g00597 382 PANTHER BNAANNG10740D PROTEIN-RELATED 60 375 IPR007592 GO:0006355
Vimu9g00597 382 MobiDBLite consensus disorder prediction 77 95 - -
Vimu9g00597 382 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00597 Vimu-Chr9 7257025 7258173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00597 42 376 GeBP Transcription Factor Family AT1G61730 29.855 2.48e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vimu9g00597 DUF573 2.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00597 - - vun:114182157 445.662