Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00567 ATGGAGCTAGACAACCGGAAAAGTGATCAGGGCAGCAATGCACCATTTTCATCCAATCTTCAGCTCTATTCTCACTGCCATAGCTCTTGCTCATGGCGAATTCCGTATGAGTACAAAGAAGTGGACCTAGCAAAAGGAGAGCAGTACAGTCCAGAGTTTGAGAGATTGAATCCTCTGCACTATGTTCCAGTATTAGTTGATGATAATGTAGTGGTTTCAGACTCTTATGCAATATTTCTGCATTTGGAGGAAAAATATACTCAGAAGCCACTGTTGCCAGTTGATCCACAGCTCAGAGCTCTGAATCTTCAGGTAGCAAGTATTGTTCATTCCAGTATACAGCCTCTTCACATGCTTACTGTTCTGAAAGATATGGAGAAAATGTTTGGTGAAGAATCAAAACCGTGGGCCCAGTTTACCATTAACAAAGGTTTCTCAGCTCTTGAAAAGCTACTGAAGGATTTTGCTGCAACATATGCCACAGGGGAACTTATCTATATGGCTGATGTATTTTTGGCTCCACAGATAGAACAGGCAGTTCAGAAGTTTGGTGTCGATATGGTAAATTGGAGAATGGGAGGAGATTTCAGTTTTGCTAGAGATCTTAAGGAAATACTAGGGAATGAGATGCTTTGGTTGTATGAAACATACAAAGCTTTGCCAGAGTTTCAAGCCTCATCACCCCAAAGACAATTTGATGCCTTCATTCACAACCCTTGA 720 0.4139 MELDNRKSDQGSNAPFSSNLQLYSHCHSSCSWRIPYEYKEVDLAKGEQYSPEFERLNPLHYVPVLVDDNVVVSDSYAIFLHLEEKYTQKPLLPVDPQLRALNLQVASIVHSSIQPLHMLTVLKDMEKMFGEESKPWAQFTINKGFSALEKLLKDFAATYATGELIYMADVFLAPQIEQAVQKFGVDMVNWRMGGDFSFARDLKEILGNEMLWLYETYKALPEFQASSPQRQFDAFIHNP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00567 239 PANTHER MALEYLACETOACETATE ISOMERASE 20 234 - -
Vimu9g00567 239 SFLD Main (cytGST) 21 180 - -
Vimu9g00567 239 Gene3D - 92 192 - -
Vimu9g00567 239 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 90 IPR004045 -
Vimu9g00567 239 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 95 235 IPR010987 -
Vimu9g00567 239 Gene3D Glutaredoxin 15 87 - -
Vimu9g00567 239 SFLD Glutathione Transferase (cytosolic) 21 180 IPR040079 -
Vimu9g00567 239 SUPERFAMILY Thioredoxin-like 19 93 IPR036249 -
Vimu9g00567 239 Pfam Glutathione S-transferase, N-terminal domain 34 90 IPR004045 -
Vimu9g00567 239 SUPERFAMILY GST C-terminal domain-like 90 187 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00567 Vimu-Chr9 6938104 6941800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00567 16 234 Glutathione S-transferase Gene Family AT2G02380 40.611 7.07e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00567 K01800 - gmx:100796296 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00567 9 6938104 6941800 Vimu9g00567 9 6938104 6941800 ECH