Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00542 ATGGTCAAGGTAGAGAAAGAAAAAGAGAAAGAGGACTCTTACAACAGTGTTGAACTTCATCTTGGGGTTGATGCTTCTCATTCTGCGCCACCAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGTGAGCTTCACCACCAGGTTTTCATCTTCAACCACTTAGCTTATAAACTTCCTCCTCCTCATCACCGTGTGCAATTCCCAAGCAACATGTCAGTTTCCTTGTGCCTGGTCAAAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTTCTTTGGCACCAAAACCTTGTAGCAAGTCACCTACCAAATCAGCTTCAGAGACACTATTTGAAATTTCAAATCCAAACCTTATTATGGCCATGCAACCTAGTGACACACCTTCCAGTACTCCATCAAGGAGCCTCAGCATTGACAATTGCTCTTCTATGA 474 0.4325 MVKVEKEKEKEDSYNSVELHLGVDASHSAPPEINHVITEAQRRELHHQVFIFNHLAYKLPPPHHRVQFPSNMSVSLCLVKSTVKGTCIEVEIVQESLWKHLKLTLLWHQNLVASHLPNQLQRHYLKFQIQTLLWPCNLVTHLPVLHQGASALTIALL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00542 157 ProSiteProfiles QLQ domain profile. 36 71 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00542 K01946 - pvu:PHAVU_010G048400g 127.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00542 9 6461822 6462780 Vimu9g00542 9 6461822 6462780 ECH
Vimu9g00542 9 6461822 6462780 Vimu6g03898 6 38197535 38207450 PCT