Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00537 CATCAGAAAATGGGAGGAAACTCGGAAAGAAAATGGTGCATCAGTGACTTCGAAATCGGAAAGCCTCTTGGAAAAGGAAAATTCGGCAGAGTCTACGTCGCCAGAGAACGCAAGGTTTCAATTTCTTCAAAAGAAATTTCAAATAGCCAACTTGTTTTAGAGCAAATTTGTTGTTGCATTGAAGGTTATTTCAAAGGAGCAATTAGAGAAGTACAAAATTCATCATCAACTGAGGAGGGAGATGGAGATTCAGTTCAGTCTGAAGCATCCGAACGTACTTCGTCTTATATCTTAAGCCTCACAAAGGCATTGGCGTATTGTCACGATAAGCATGTTATTCACAGGGATATCAAGCCTGAAAATTTGTTGCTTGATCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCAGTACAGTCTAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTTGATAACTGGACTTTAGGTATCCTTTGCTATGAATTCCTTTATGGTGCTCCGCCATTTGAGGCTGATAGTCAAGTTGATACCTTCAAAAGGATAATGAAGGTTGACTTGAGTTTCCCCTCTACTCCTTATGTTTCTTCAGAAGCCAAACATCTTATTAGTCGGCTTCTGGTAAAAGACTCTTCACGAAGGCTCTCTCTTCAGAGGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTATAGGTGTCAGCAGCTAG 768 0.4049 HQKMGGNSERKWCISDFEIGKPLGKGKFGRVYVARERKVSISSKEISNSQLVLEQICCCIEGYFKGAIREVQNSSSTEEGDGDSVQSEASERTSSYILSLTKALAYCHDKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEADSQVDTFKRIMKVDLSFPSTPYVSSEAKHLISRLLVKDSSRRLSLQRIMEHPWIIKNANPIGVSS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00537 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
Vimu9g00537 255 Pfam Protein kinase domain 90 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00537 255 Gene3D Transferase(Phosphotransferase) domain 1 79 253 - -
Vimu9g00537 255 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 9 47 IPR030616 GO:0004672
Vimu9g00537 255 SUPERFAMILY Protein kinase-like (PK-like) 11 247 IPR011009 -
Vimu9g00537 255 Gene3D Phosphorylase Kinase; domain 1 5 78 - -
Vimu9g00537 255 SMART serkin_6 17 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00537 255 PIRSF ILK 7 56 - -
Vimu9g00537 255 PIRSF ILK 86 247 - -
Vimu9g00537 255 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00537 Vimu-Chr9 6436728 6439130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00537 9 250 CBL-interacting serine-threonine protein kinases AT5G10930 34.926 1.21e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vimu9g00537 Pkinase 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00537 K08850 - gmx:100775802 352.443