Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00518 ATGTACGTTGTTAGTGCACACAAGAGAAGCAAAACAATGGAGTACCTTTTTCCACTTCTTCTTCAAATCACCATAGTTTGTGTAACCATTTATGTACTCATCTCAACCTTCAAACCAATGAAAACCTCAAAATACCCTCCAGGGCCTCACCCTTTTCCCATCATAGGAAACATCTTGGACCTTGGAAACCTGCCACACCAAAAACTTGCCAAGCTTTCTCAAATTTATGGTCCTATTATGAGTCTCAAGCTTGGTAGCATTACCACCATAGTCATTTCCTCTCCCCATGTTGCCAGAGAAGTACTGCAAACAAAAGATCAAATCTTTTCTAACAGGACAATCCCAGATGCTGCTCGAGCTCTTGATCATCACTCAATTTCAGTTGCATGGCTTCCACCTTCAGAAGAATGGAGGATCCTTAGGAGGGCTTGTGTTGCCAAAGTGTTCTCTTCTAAGCAGCTTAATTCTACAGAACTTATTCGCCAAAGTAAGGTGAAAGAGTTGATGGATTATGTAAAGGAAAGATGTCAGAAAGGTGAAGCCTTGGATATTGGTGAGGCTTGCTTCACAACTGTGCTTAATTCCATATCAAACACTTTCTTCTCAATGGATTTAGCTCATTACGCTTCTGACAAGTCTCATGAGTTGAAGGACATCATTTGCGGCATCATGGAAGAAGCTGGAAGGCCTAATGTTGTTGACTTTTTTCCAGTCTTTCGCATGCTTGATCCACAGGGTGCTCGGAGAAGAATGAATGGTTACTTTGGAAAGTTAATTGCGTTTTTTGATGGACTTATAGAAGAAAGATTGCGTTTAAGGGCATCAGAAAATGAAGCCAAGGAAAGCAAGGACGTGTTGGATTCTTTGTTGGAACTTATGCTTGAAGACAACTCACAACTGACTCGTCCCCATGTTCTGCATCTGTTTCTAGATTTATTTGTGGCTGGGATAGACACAACGTCAAGCTCAATAGAATGGGCGATGACAGAGTTGATCCATAATCCAGAAAAACTAGAAAAAGTTAGAAAAGAGATTCAAAGCCATGGTAAAGGTGAACAGCTAAAAGAATCAGATATCTCAAAGCTTCCTTACTTGCAAGCAATGGTTAAGGAAACCTTTCGTCTACATCCACCCGCCTCAATGTTACTGCCACACAAGACAGAAGTTGATGTGGAAATATGTAACTTCATGGTGCCTAGAAGTGCACAAATTCTTATCAATGTGTGGGGCATGGGAAGGGATTCAAGTATTTGGACAAACCCAAATGAATTTAGACCCGAAAGATTCTTTGAAACTGACATTGATTTTAAAGGGAAAGATTTTGAGATGATACCCTTTGGAGCTGGAAGAAGGATCTGTCCTGGGTTACCATTGGCTTTTAGAACTATTCACATTGTGTTGGCCTCTCTTCTATGCAATTATGATTGGAAGCTCAAGGATGGAGAAAAACATGAGGAAATGGATATGCTAGAGAAATCTGGGTTGATCTCGCACAAGGCTCAACCTCTCTTCATCATTCCCATCCAAGCATAA 1533 0.4083 MYVVSAHKRSKTMEYLFPLLLQITIVCVTIYVLISTFKPMKTSKYPPGPHPFPIIGNILDLGNLPHQKLAKLSQIYGPIMSLKLGSITTIVISSPHVAREVLQTKDQIFSNRTIPDAARALDHHSISVAWLPPSEEWRILRRACVAKVFSSKQLNSTELIRQSKVKELMDYVKERCQKGEALDIGEACFTTVLNSISNTFFSMDLAHYASDKSHELKDIICGIMEEAGRPNVVDFFPVFRMLDPQGARRRMNGYFGKLIAFFDGLIEERLRLRASENEAKESKDVLDSLLELMLEDNSQLTRPHVLHLFLDLFVAGIDTTSSSIEWAMTELIHNPEKLEKVRKEIQSHGKGEQLKESDISKLPYLQAMVKETFRLHPPASMLLPHKTEVDVEICNFMVPRSAQILINVWGMGRDSSIWTNPNEFRPERFFETDIDFKGKDFEMIPFGAGRRICPGLPLAFRTIHIVLASLLCNYDWKLKDGEKHEEMDMLEKSGLISHKAQPLFIIPIQA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00518 510 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 Coils Coil 272 292 - -
Vimu9g00518 510 CDD CYP76-like 73 507 - -
Vimu9g00518 510 FunFam Cytochrome P450 76C4 38 506 - -
Vimu9g00518 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vimu9g00518 510 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 25 509 - -
Vimu9g00518 510 Pfam Cytochrome P450 46 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 Gene3D Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 SUPERFAMILY Cytochrome P450 46 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00518 510 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00518 Vimu-Chr9 6102270 6105364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00518 41 509 Cytochrome P450 AT2G45550 48.203 1.44e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00518 - - gmx:100809483 790.801