Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00507 ATGCAAGGAATGTATCCTCTGAATGGACAGGAACTGTTGTTGTTTAAGTCATCAGTTAGCTTCATTGATCACCTGCAAGAATTTCTCAGTGCTATTTTGACTGCTTGTGTGTTAGTTATTCCTCCTTTCAACGAGCTAAAAGAAAATTTGTATTCTATGATAGATTTCCTGCAGGCATATTTTGTTAATAGGCTCACAGCCGTTCCATCACTAATGAAAACTATTCTTCCTGGATTGAAAACCAATGCTAACATGCGAGTTGAAAATTCATTGAAATTGCTTGTGCTCAGCGGTGAAACTTTTTCGTTGACCTTGTGGGAGATGCTTTCAACTATATTACCTAAGACATCAATCTTGAATTTATATGGAAGCACTGAGTGTTGCTTTGTTCCTGCTATTCAATGCTTATCTAGTCATGCATGTTGGATATTACAGATTAAGGTCTCTGGTGACTGTACATATTTTGATTGCAAGAGAATGCCATTGATTTTTAAGGAAGAAAGGCTAACCAGTGTTCCAATAGGTTTACCCATTCCTAACTGTGATGTGATTCTTAGTGAAAATGATGCATCAAATGAGGGAGAGCTATATGTTGGTGGTCATTGCATCTTTAGGGGTTACTACGATGAATCTAAGGAAATGTCATTTGCAAAGTTGCTTCCACATTACAGTTGTGGTGATTTTGTTAAAGGATGCGAAGATAAATTATACTTTAGAACAGGTGATTTAGTCAAACAGTTGCCTAGTGGTGACTTTGTATTTTTGGGAAGAAAAGATCGCATTATAAAAATCAACGGACAGCGTATTGCCCTAGAAGAGGTTGAAGATTTGTTAAGGGAGCATCCACATATAAACGATGCTGCTGTAGTTTGTCGAAATAATAAAGCAGAACTTGTGCTTGTTGAAGCCTTTATCATACTGAAGAAAAAAGAAAGCTTGGGTGAATCATTAATACCTGCAATCAGAAGTTGGATGATTAACAAACTTCCTTCTGTTGTACTTCCCAACCGTTACTTCTTTATAGAATCATTCCCCCTGTCTCCTAGTGGTAAGGTTAACTATGAATTGTTGTTTGGCTCAGAATTATTGACAAAGAATGTCAAAGATAAAGTTGGTGACATTGATTGCAGCAATCTTTTGCAACTTATTAAAAAGGCTTTTCATGATGCTTTGATGATTGAAAAGGTTTGTGATGATGATGATTTCTTTATGATGGGCGGTAATTCCCTTTCTGCTGCACATGTTGCTTATAGTTTGGGGATTGACATGAGATTTCTTTACTACTATCCAAGCGCTCTTAAGCTTTGTATGGCTCTTCTCCGGAAAAAAGGATCTTGCACTTTGCATAACAGTCTGGACTTTTGTTTGCAAATAAACACAGACAGACAAGATAACCATATTTCTATTAATCATACTGAAAATTCTAATCCTCCTGAGTCTAGGACGACTTCCAAAGATAACAATGATGTTCCTTTTCCTTCTAAACGTTTAAAGAGGTGTTTGACAGATGTTACATCATGGGGTGATGAATCATTCCCATGGTATTCCCCTTCACTATTATCATTCTCATTGAACCGATGCAACAAGGTCTTGCATAAAGGGCAGCAGGAAGTAATTGATATGCACCAAAATACTTGGTCTGCAGACATTCGTAGAGGCAACAGAGGTCACATGAAAGACTTTTGGAAAGTTTACATGGAGTCTTGTGTTGATGCCTCACCATTGCTTGTGTTTAAAGGAACACACATTTATTTGTTCATTGGATCTCACTCTCATAAATTTCTCTGCATAAATGCTAGAAGTGGTTCTGTCCAGTGGGAGATCAAACTAGAAGGGCGCATTGAAAGTACAGCAGCAATTGTTTCTGATTTTTCCCAGGTTGTTGTTGGTTGTTACATGGGAAAAATATATTTTCTTGATTTTTTGAATGGACACATATGTTGGATTTTCCAAACTTCTGGTGAGGTATCTTCTTCTAATGCTCAAATTTTTATCTTTTCTTGTTTGTGGTTTATGGTGTCTTTCTTTTAT 2031 0.3683 MQGMYPLNGQELLLFKSSVSFIDHLQEFLSAILTACVLVIPPFNELKENLYSMIDFLQAYFVNRLTAVPSLMKTILPGLKTNANMRVENSLKLLVLSGETFSLTLWEMLSTILPKTSILNLYGSTECCFVPAIQCLSSHACWILQIKVSGDCTYFDCKRMPLIFKEERLTSVPIGLPIPNCDVILSENDASNEGELYVGGHCIFRGYYDESKEMSFAKLLPHYSCGDFVKGCEDKLYFRTGDLVKQLPSGDFVFLGRKDRIIKINGQRIALEEVEDLLREHPHINDAAVVCRNNKAELVLVEAFIILKKKESLGESLIPAIRSWMINKLPSVVLPNRYFFIESFPLSPSGKVNYELLFGSELLTKNVKDKVGDIDCSNLLQLIKKAFHDALMIEKVCDDDDFFMMGGNSLSAAHVAYSLGIDMRFLYYYPSALKLCMALLRKKGSCTLHNSLDFCLQINTDRQDNHISINHTENSNPPESRTTSKDNNDVPFPSKRLKRCLTDVTSWGDESFPWYSPSLLSFSLNRCNKVLHKGQQEVIDMHQNTWSADIRRGNRGHMKDFWKVYMESCVDASPLLVFKGTHIYLFIGSHSHKFLCINARSGSVQWEIKLEGRIESTAAIVSDFSQVVVGCYMGKIYFLDFLNGHICWIFQTSGEVSSSNAQIFIFSCLWFMVSFFY 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00507 677 Gene3D - 377 439 IPR036736 -
Vimu9g00507 677 Gene3D - 263 361 IPR045851 -
Vimu9g00507 677 SUPERFAMILY Acetyl-CoA synthetase-like 3 357 - -
Vimu9g00507 677 MobiDBLite consensus disorder prediction 467 491 - -
Vimu9g00507 677 Pfam AMP-binding enzyme C-terminal domain 273 351 IPR025110 -
Vimu9g00507 677 Pfam PQQ enzyme repeat 627 659 IPR002372 -
Vimu9g00507 677 Gene3D - 532 667 IPR015943 GO:0005515
Vimu9g00507 677 Pfam AMP-binding enzyme 25 264 IPR000873 -
Vimu9g00507 677 MobiDBLite consensus disorder prediction 467 490 - -
Vimu9g00507 677 Gene3D - 1 262 IPR042099 -
Vimu9g00507 677 PANTHER BETA-ALANINE-ACTIVATING ENZYME 148 659 - -
Vimu9g00507 677 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 585 657 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00507 Vimu-Chr9 6002504 6007335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00507 36 352 Monolignol Biosynthesis Gene Families AT1G20480 23.765 9.56e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00507 K00142 - gmx:100820175 1066.6