Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00500 ATGGAAGCACAAAGCTCTCGGCAAATGGAAATTATTGAGATGAGTGGAGATTTTGCACAAAACTCTCAGCAAACTCAAGTTATTGAGACTAGTGGCGATTTTCTTGATGGCAAAAGAAGAAGGATTTGTGGGGAAGCACCATGTGGGTTTGCAGATGTCGGATCCATCTCCAAGGATTCTCAAGAAAGATCATCTTCTATGCGAAAACTCGTTATGGCATTGATTTTTTGTGTTATTTTTATGATTGGTGAAGTGGTTGGTGGCATCAAAGCTGACAGTCTTGTTATACTGACTGATGCGGCACATTTGCTTTCTGATGTTGCAGCCTTTGCGATCTCTTTGTTTTCTTTGTGGGCTGCTGGATGGGAAGCTACAACTCGCCACTCGTATGGATTTTTTCGAATAGAAATTCTTGGTGCATTGGTTTCTATTCAATTAATATGGTGTCTTGCTGGTATTTTAGTATATGAAGCCATTAATAGAATCATTGCTGGTCCTAAAAGCGTGAATGGTTTCTTAATGTTTTTGATTTCTGCATTTGGTTTTGTGGTTAATATCATCATGGCTTTGTTATTAGGTCATAATCATGGTCACAAACATGGACATCAACATGGCCACAATCATGATGATGATGAGCATCATCACACAGATGATCACACACACCATCACGATGATCATCATTCACAAACTAAGAAAAAGAAGAAGCAATGGAACATAAATGTACAGGGAGCTTTTCTCCATGTTCTTGGAGATTGTATCCCGAGTTGCAAATAG 774 0.3902 MEAQSSRQMEIIEMSGDFAQNSQQTQVIETSGDFLDGKRRRICGEAPCGFADVGSISKDSQERSSSMRKLVMALIFCVIFMIGEVVGGIKADSLVILTDAAHLLSDVAAFAISLFSLWAAGWEATTRHSYGFFRIEILGALVSIQLIWCLAGILVYEAINRIIAGPKSVNGFLMFLISAFGFVVNIIMALLLGHNHGHKHGHQHGHNHDDDEHHHTDDHTHHHDDHHSQTKKKKKQWNINVQGAFLHVLGDCIPSCK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00500 257 Gene3D Cation efflux protein transmembrane domain 66 256 IPR027469 -
Vimu9g00500 257 SUPERFAMILY Cation efflux protein transmembrane domain-like 64 255 IPR027469 -
Vimu9g00500 257 MobiDBLite consensus disorder prediction 204 225 - -
Vimu9g00500 257 Pfam Cation efflux family 70 255 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vimu9g00500 257 MobiDBLite consensus disorder prediction 199 234 - -
Vimu9g00500 257 NCBIfam cation diffusion facilitator family transporter 67 256 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vimu9g00500 257 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 29 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00500 Vimu-Chr9 5875991 5876764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00500 41 255 Inorganic Solute Cotransporters AT2G46800 56.327 3.41e-82 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00500 K14689 - gmx:100790458 282.722