Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00496 GTCCTCAAGAGAAGCAAAACAATGGAGTACCTTCTTCAACTTCTTCAAATCACCATAGTGTGTGTAACCATTTATGTACTCGTATCAAGCTTCAAACCAATGAAAACCTCAAAGTATCCTCCAGGGCCTCATCCTTTTCCCATCATAGGAAACATCTTGGACCTTGGAAATCAGCCTCACCAAGCACTTGCCAAGCTTTCTCAAATTTATGGTCCTATTATGAGTCTCAAGCTTGGTAGCATTACCACCATAGTCATTTCCTCTCCACATGTTGCCAGAGAAGTACTGCAAACAAAAGATCAAATCTTTTCCAACAGGACAATCCCAGATGCTGTTCGAGCTCTTGATCATCACACACTTTCAGTGGTGTGGTTGCCACCTTCAGCACTGTGGAGGACCCTTAGGAGAGCTTGTGCCACCAAAGTGTTCTCTTCCCAGCAACTTGAATCCACACAAGTTTGTCGACAGAGGAAGGTGAAAGAATTGATGGATTATGTAAAGGAAAGATGTCAGAAAGGTGAAGCCTTGGATATTGGTGAGGCTTCCTTCACAACTGTGCTTAATTCCATATCAAACACTTTCTTCTCAATGGATTTAGCTCATTACGCTTCTGACAAGTCTCAAGAGTTCAAAGACATCATTTGGGGCATCATGGAAGACGCTGGAAGGCCTAATGTTGTTGAATTTTTTCCAATCTTTCGCATGCTTGATCCACAGGGTGCTCGGAGAAGAATGAATGGTTACTTTGGAAAGTTAATTGCGTTTTTTGATGGACTCATAGAAGAAAGATTGCGTTTAAGGGCATCAGAAAATGAAGCCAAGGCATGCAAGGACGTGTTGGATTCTGTGTTGGAACTCATGCTTGAAGACAATTCACAAGTGACTCGCGCTCATGTTCTGCATTTGTTTGTGGATTTATTTGTGGCTGGAATAGACACGACATCAAGCTCTATAGAATGGGCTATGGCTGAGTTGCTACGTAACCCAGAAAAGCTAGAAAAAGTGAGGGAAGAGCTTCACCAAGTCCTTGTCAAAGGTGAGCAACTAGAAGAATCACATATCTCAAAGCTTCCTTATCTACAAGCAGTGGTGAAGGAAACTTTCCGCTTGCATCCACCTGCCCCAATGTTAGTGCCACACAAGTCAGAAGTTGATGTTGAACTATGTGACTTCGTTGTACCTAAAAGTTCCCAAATTCTGGTTAATGTATGGGCCATGGGTAGAGATTCAAGTATTTGGACAAACCCAGACGAATTCAGACCTGAAAGATTCTTGGAAAGTGACCTTGATTTTAAGGGCCAAGATTTTGAACTAATACCCTTTGGAGCAGGAAGAAGGATCTGTCCTGGATTGCCATTGGCTTCCAGAACTGTTCATATTGTATTGGCCTCTCTTCTATGCAAGTATAATTGGAAGCTGAAAGATGGACAAAAGCCACAAGACATGGATATATCTGAGAAATATGGGATTACCTTGCACAAGGCACAACCTCTCCTAGTCATTCCAGTCCAAGCATAA 1518 0.4242 VLKRSKTMEYLLQLLQITIVCVTIYVLVSSFKPMKTSKYPPGPHPFPIIGNILDLGNQPHQALAKLSQIYGPIMSLKLGSITTIVISSPHVAREVLQTKDQIFSNRTIPDAVRALDHHTLSVVWLPPSALWRTLRRACATKVFSSQQLESTQVCRQRKVKELMDYVKERCQKGEALDIGEASFTTVLNSISNTFFSMDLAHYASDKSQEFKDIIWGIMEDAGRPNVVEFFPIFRMLDPQGARRRMNGYFGKLIAFFDGLIEERLRLRASENEAKACKDVLDSVLELMLEDNSQVTRAHVLHLFVDLFVAGIDTTSSSIEWAMAELLRNPEKLEKVREELHQVLVKGEQLEESHISKLPYLQAVVKETFRLHPPAPMLVPHKSEVDVELCDFVVPKSSQILVNVWAMGRDSSIWTNPDEFRPERFLESDLDFKGQDFELIPFGAGRRICPGLPLASRTVHIVLASLLCKYNWKLKDGQKPQDMDISEKYGITLHKAQPLLVIPVQA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00496 505 Gene3D Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 FunFam Cytochrome P450 76C4 32 501 - -
Vimu9g00496 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 19 504 - -
Vimu9g00496 505 SUPERFAMILY Cytochrome P450 40 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 Coils Coil 332 352 - -
Vimu9g00496 505 Pfam Cytochrome P450 40 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 CDD CYP76-like 67 502 - -
Vimu9g00496 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vimu9g00496 505 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00496 505 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00496 Vimu-Chr9 5828466 5830055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00496 35 504 Cytochrome P450 AT2G45550 50.951 1.64e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00496 - - gmx:100809483 868.226