Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00489 ATGGCGGCGATTCCGAAACGTATCAACCCTTCAACCCTGATCAGAGTAAAGCAATATAGCAAGAGGAGCAGCACTGTCTTTGGTGATTTTGGCAAACAACAGTCGGCGTCGTTCACGACGGCGAAGACACGTCGTGAATCCAGAGGGTTTCTTCATCGCGAGGGAAGGAAGGCAGAGGGCTCTAATGCAATTCGCGGAGAAGCTGGGCTGAAATCAATCGGAAGGGTCTTCATAGTAACGTCTCAGAAGGCAATTGGTTTTGTCGGCGTTGATGAGCTCAGTTTGAAGGTGGCGGAGAAGACGAAAGAAGATCGAGGCAGACTCAAGAAAAGAAGGGTGTCGCTGGCACATACTCCGTTTGCAAACACTAGTGACCGTGGGTGTCGATTAAGGGCACTGACGGAGGCGCCAGCAGAACCTCCAGTGGTGGCTGCCTCAGAATGGAAGACACGACAGCGTGCCTCTAGATTAGAAGGAAGTTGTGTCACGCAGAAGAAGAAGGGAGCAGTGTCGTTAGCTCTAGGCAGTGCTGGCGGTTGGCTTGACGGAGAGTGGTGGCCCTTGCGGTGGCTGGCGATGGGAGTGCGACGCGAAGCGGCAAGGATAATCTTCTCTCGCGCAACAACCGGTGGAAGGAGGAAAGCATCCGCCCCAGCCGGTGATGGCTCCAGCGGCGAACGGAGTCGCCGGCGGCGCTCCGAATTGCAGCTCCCAACGAGACGAGCCTCCATAGCTTTCTTCGAAGAGAACCCTAGGTATAGGCTTCCAGGGGATCTGAGGCAAGTGAGGGGAATTTCTGATGGGCCTTGGGGCTTGGCTGATGGACCGTTTCTTCTTCCTGCCACCATGCAACGCTATTCATACCCCCCTATGCTTCTACAAACAAAAACGAAAAAGGCCTGGGCCAACACCTACCAAATGCACCCCCCAAATGATACTGCCGCACCCCTACCTTTGGTATTGCCTTCGGGCAGGCGTTGTAGGGTGCTAACACCTTCCCTACACGTAACCGACTCCCGAACCCAATTTTTGGTTTTCGTGGACCGTTTTTCCAGAATAAACTATGGTGGCGACTCCAAATCTCTTTTCCAAAATCGTTTCTTTTTGGATCGTCGTCCCGTCGCGATTCCGGTTGCAACACTCTCCAACAAATTTTCTAGGTTTGTGCGACTCTCCAACAAATTTCACGAGGTTCGTGGGCATCTCGAGCAAATCTCACGAGGTTCTTGTGCCTCTCAACAAATTTCACGAGGTTCGTGGACATCTCCAGCAAATTTAACGAGGTTCGTACGCCTCTCCAGCAAATTTCACGAGAATCGTGATAGAGGAAACGCTTTGAGGTACAAAATAACAGCTTTGGTATCAATTTTAATTGCCGGTGCAATTGGGGTGTGTATTCCTTTTATGGGGAAAGTCATACCAGCGTTAAGTCCGGATAAGAATGTTTTCTTCCTAGTAAAAGCTTTTACAGCTGGTGTGATTCTAGCCACTGGATTCATTCACATATTACTGGATGCTTTGGAGAATCTGACCTCACCTTACTTAAAAGAGCATCCATGGGAGAATTTTCCTTCACTGGGTTTGTGTTAA 1590 0.5044 MAAIPKRINPSTLIRVKQYSKRSSTVFGDFGKQQSASFTTAKTRRESRGFLHREGRKAEGSNAIRGEAGLKSIGRVFIVTSQKAIGFVGVDELSLKVAEKTKEDRGRLKKRRVSLAHTPFANTSDRGCRLRALTEAPAEPPVVAASEWKTRQRASRLEGSCVTQKKKGAVSLALGSAGGWLDGEWWPLRWLAMGVRREAARIIFSRATTGGRRKASAPAGDGSSGERSRRRRSELQLPTRRASIAFFEENPRYRLPGDLRQVRGISDGPWGLADGPFLLPATMQRYSYPPMLLQTKTKKAWANTYQMHPPNDTAAPLPLVLPSGRRCRVLTPSLHVTDSRTQFLVFVDRFSRINYGGDSKSLFQNRFFLDRRPVAIPVATLSNKFSRFVRLSNKFHEVRGHLEQISRGSCASQQISRGSWTSPANLTRFVRLSSKFHENRDRGNALRYKITALVSILIAGAIGVCIPFMGKVIPALSPDKNVFFLVKAFTAGVILATGFIHILLDALENLTSPYLKEHPWENFPSLGLC 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00489 529 PANTHER ZINC/IRON TRANSPORTER 445 520 - -
Vimu9g00489 529 MobiDBLite consensus disorder prediction 210 236 - -
Vimu9g00489 529 Pfam ZIP Zinc transporter 447 524 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00489 Vimu-Chr9 5753634 5756458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00489 441 528 Inorganic Solute Cotransporters AT1G31260 47.727 1.09e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00489 K14709 - dcr:108211893 140.969