Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00453 ATGAACTTCAGGGCACTCCTACTATTCCTGGCCTTTATGGTGACAGAGTCAGTGGCAGTAGTGGAGAAGCAGACATACATAGTACACATGGACAAGACCAAGATGGAAGCCTCAGTCCATTCTCAAGGCTTGGCAAAACCTTGGTTCAAATCAGTCATCGATTTGATCTCTGAAGCTTCATTCGAAGAAGAAGAAGAAGAAGGAGAACCTCAACTCCTTTATGTTTATGAAACCAGCCTTTTTGGTTTTGCTGCTCAACTTTCAAATAAGCAGCTTGAGTACTTGAACCAAGTGGATGGCTTCGTTGCAGCATTACCTGATGAACTATTGACCCTTCACACAACCTACACCTCCCATTTTCTTGGCCTGCAGGAGGGAGAAGGACTTTGGAGTGCTTCTAACTTGGCCTCAGATGTGATCATAGGAGTCCTTGATACAGGAATATGGCCTGAACACATCAGTTTCCAAGACACCGGTTTGTCCGAAGTACCCTCTCGGTGGAAAGGATCTTGTGAAGCAGGCACCAATTTCTCTGCCTCAAGTTGTAACAAGAAGCTTGTTGGTGCAAGAGTCTTTCTAAAAGGGTATGAAAAATTTGCAGGAAGGATCAATGAAACCATGGACTATCGTTCTGCTAGAGATGCTCAAGGACATGGATCACACACAGCCTCAACTGCAGCTGGAAACACGGTTAAGAATGCCAGCTTTTTCGGCTTGGCCAGTGGTTCAGCCACTGGAATGAGGTATACCTCAAGAATAGCTGCTTATAAAGTATGCTGGCGTTTTGGCTGTGCTAACTCTGACATATTAGCAGCTATTGACAAAGCTGTTGCCGATGGTGTTGATGTACTGTCACTCTCATTAGGTGGCAGTGCCAGACCTTATTACAGCGATAGCATTGCCATAGCCTCATTTGGAGCAACACAAAACGGTGTTTTTGTTTCTTGCTCGGCAGGCAATTCAGGCCCTTTTAGTTCTACTGTTGGAAATGTTGCCCCGTGGATCATGACTGTTGCTGCTAGCTACACTGATAGGAGCTTTCCAACTCAAGTGAAGCTTGGAAATGGAAAGCTTTTCAAAGGGTCATCATTGTACACGGGCAAGAAAACTAAGCAATTGCCTCTTGTTTATGTCAATTCCTCAAAAGAACATAGGACAGCACAGTATTGCACCAAAGGTTCTCTTGATCCAAAGGTTGTCAAAGGAAAAATAGTTGCCTGCGAACGTGGAATAAACAGTAGAACTGCAAAGGGAGAAGAAGTGAAGATGGCAGGTGGAGCAGGAATAATACTACTCAACTCAGAAAACCAGGGAGAAGAACTTTTTGCTGACCATCATGTTTTGCCAGGCACATCTTTAGGGGCCTCTGCAAGTAAAATAATCAGAAGCTACATTCACTCAGCAAAAGCACCAACAGCTTCAATTTCCTTCCAAGGGACAGCATATGGAGACCCTGCACCAGCTATGGCAGCATTTTCTTCTAGAGGACCAAGTGCAGTAGGAGGAGATGTGATCAAACCAGATGTTACCGCACCTGGTGTGAACATCTTGGCTGCTTGGCCTCCCATAACTAGTCCAAGCATGCTCAAGAGCGACAAAACAAGTCCACTATTTAACATAGTCTCAGGTACCTCAATGTCATGTCCTCATGTTAGTGGTATAGCAGCCTTGATCAAATCTGCGCACAATGGTTGGTCACCTGCAGCCATCAAATCTGCTCTGATGACTACTGCTTCTGTATCTAACAACAAAGGTGCTGCAATTGCTGACTATGGTTCAAAAAATTCAGCACTTGCTGACCCCTTTGCATTTGGTTCAGGTCATGTTAACCCTGAAAGAGCTTCTGATCCAGGATTGGTCTATGACATCACCACCAAAGATTACTTAAATTACTTGTGCAGCCTGAAATACACATCCTCCCAGATTTCTTTATTGTCAAAAGGTAATTTTACATGCACCAAAAACTCAGCTCTTCAACCTGGTGACTTGAACTACCCCTCATTTGCTGTGCTATTTGGCACAAGTGCTCTAAAGGCTAGTGTGACATTCAAGAGGGTAGTTACAAATGTAGGAAGCCCCAAAATTTCTTATGCAGTGAAGCTGGAAGAACCAAATGGAGTATCTGTCAGGGTTGAACCAAGGAATATCAGGTTCATAAAAACTGGTCAGAAATTGAGCTATAAGGTGATTTTTGTTTCAAATCAGAATACAACAGTTACCAGAAATTCATCATTTGGATCACTTACTTGGGTATCAGGTAAATATGCTGTTAGAAGCCCTATAGCAGTGACATGGAAATGA 2301 0.4359 MNFRALLLFLAFMVTESVAVVEKQTYIVHMDKTKMEASVHSQGLAKPWFKSVIDLISEASFEEEEEEGEPQLLYVYETSLFGFAAQLSNKQLEYLNQVDGFVAALPDELLTLHTTYTSHFLGLQEGEGLWSASNLASDVIIGVLDTGIWPEHISFQDTGLSEVPSRWKGSCEAGTNFSASSCNKKLVGARVFLKGYEKFAGRINETMDYRSARDAQGHGSHTASTAAGNTVKNASFFGLASGSATGMRYTSRIAAYKVCWRFGCANSDILAAIDKAVADGVDVLSLSLGGSARPYYSDSIAIASFGATQNGVFVSCSAGNSGPFSSTVGNVAPWIMTVAASYTDRSFPTQVKLGNGKLFKGSSLYTGKKTKQLPLVYVNSSKEHRTAQYCTKGSLDPKVVKGKIVACERGINSRTAKGEEVKMAGGAGIILLNSENQGEELFADHHVLPGTSLGASASKIIRSYIHSAKAPTASISFQGTAYGDPAPAMAAFSSRGPSAVGGDVIKPDVTAPGVNILAAWPPITSPSMLKSDKTSPLFNIVSGTSMSCPHVSGIAALIKSAHNGWSPAAIKSALMTTASVSNNKGAAIADYGSKNSALADPFAFGSGHVNPERASDPGLVYDITTKDYLNYLCSLKYTSSQISLLSKGNFTCTKNSALQPGDLNYPSFAVLFGTSALKASVTFKRVVTNVGSPKISYAVKLEEPNGVSVRVEPRNIRFIKTGQKLSYKVIFVSNQNTTVTRNSSFGSLTWVSGKYAVRSPIAVTWK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00453 766 CDD PA_subtilisin_like 351 475 - -
Vimu9g00453 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Vimu9g00453 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 763 IPR045051 -
Vimu9g00453 766 Gene3D Peptidase S8/S53 domain 138 628 IPR036852 GO:0004252|GO:0006508
Vimu9g00453 766 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Vimu9g00453 766 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vimu9g00453 766 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vimu9g00453 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 113 IPR037045 -
Vimu9g00453 766 SUPERFAMILY Subtilisin-like 112 619 IPR036852 GO:0004252|GO:0006508
Vimu9g00453 766 Pfam Peptidase inhibitor I9 25 113 IPR010259 -
Vimu9g00453 766 FunFam subtilisin-like protease SBT1.5 344 482 - -
Vimu9g00453 766 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 141 152 IPR023827 -
Vimu9g00453 766 Pfam Subtilase family 137 585 IPR000209 GO:0006508|GO:0008236
Vimu9g00453 766 FunFam Subtilisin-like protease SBT1.5 632 766 - -
Vimu9g00453 766 Pfam PA domain 373 457 IPR003137 -
Vimu9g00453 766 Gene3D - 632 765 - -
Vimu9g00453 766 FunFam Subtilisin-like protease SBT1.5 138 356 - -
Vimu9g00453 766 Pfam Fibronectin type-III domain 662 763 IPR041469 -
Vimu9g00453 766 CDD Peptidases_S8_3 110 579 IPR034197 -
Vimu9g00453 766 ProSiteProfiles Serine proteases, subtilase domain profile. 115 615 - -
Vimu9g00453 766 Gene3D - 344 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00453 Vimu-Chr9 5382785 5385085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00453 22 766 Subtilisin-like Serine Gene Family AT1G01900 56.267 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00453 - - gmx:100817581 1281.16