Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu9g00449 | ATGGACAATTCTGGGTCTTCACAACCTCCATATGGGTATCCAAACCCTTATTTGTACACTGGCAACACCCCTCCATACCCTCCTCCTGATCCATATGCACCACCACCATATCCATATCCATATCCACCAAATGCTCCAGATACCTTCAACTACTCATATCCCCCATCTTCTCTACCACCCTCAGCACCCTATTCTAGCCACACATACCTTCCTCCTCTTCATATTCCACCACCACCTCATGATTCCTTTGCATTTTCTATGCCTCAATCACCCAATACTTATCCTCCAGAATGGAGTAACACAGGAGGTGAAGTACCTCAAAATAGTGATAGTTATAAGCCTCCTGCCGTTTCTATTTACCCTCCTTTGGATGATCGCATGAGCATTGTCAGGCTGTCTGAAACCACAAATACACTTCCTTTGTTGACTCGATCCCGTTCAATTTCAAATTACATTAGAGATGAGTTTTATGGATTCTCTGTCTACTCCCCCTCAGATTTGGATAAAGAGGACCCTACTAGACCTTCTGTTCAATCTGATGACTCAATGGGTGCTCACAGCTTGCAGATTGTCCCAGTCCAGAACAAAGCGTCTCTGCCAGTTTTGCTCCTGCATGGGAATTTAGATATTTGGGTTCATCGAGCCAAACACCTTCCAAACATGGACATGTTCCACAAGACTTTGGGAGATGTGTTTGGGAAGTTGCCTGTAAATGTCAACAAGGTGGATGGAACGGTGAGCCAGAAGATTACCAGTGATCCTTATGTAACAGTTTCTGTGTCTAATGCTGTTATTGGGAGGACTTTTGTGATTAGCAATAGTGAAAACCCTGTGTGGGAGCAACATTTCTATGTTCCTGTTGCACATCATGTAGCTGAAGTTCATTTTGTTGTGAAGGACAGTGATGTGGTGGGTTCGCAGCTCATTGGTGTTGTGGCAATTCCAGCTGAAAAGATATACTCAGGGGAAAAGATACATGGGAGCTACCCTATTCTGAATAGCAGTGGGAAGCCATGTAAGCCAGGTGCTATCTTGAGATTATCCATTCAATACATTCCAATAGAGAAACTTATCACTTATCATCAAGGAGTTGGAGGTGGTCCTGAATATCATGGGGTTCCTGGCACGTATTTTCCATTGAGGAAAGGTGGAATGGTAAATCTTTATCAAGATGCTCATGTCCCAAGTGGTTCTCTACCTAATGTTAAGCTTAACCATGGCTTGTATTACAATCATGGAAAGTGTTGGAATGACATCTTTGAAGCCATACGTGCAGCTCAGAGATTGGTTTACATTACGGGGTGGTCTGTGTGGCACAAAGTTAGGTTGGTAAGGGATGCTGACAATGCAACGGATTCCACCCTGGGTGAACTTCTTAGGACTAAGTCATCGGAGGGAGTCAGAGTGCTTCTACTTGTATGGGATGACCCTACATCAAGAAGCATTCTTGGTTACAAAATGGATGGTGTAATGGCAACTCATGACGAGGAAACTAGACGATTTTTCAAGCACTCTTCTGTGCAAGTTCTGCTTTGTCCTCGCTTTGCTGGAAAACGACATAGTTGGGCCAAACAAAAGTTCGCTATACTTTATGATGGACATACTACTACTGATGGAGTGGTTCCATTTGTTTTAGAGTTCCAAAATAATTTTTTTCTTTCTAATTATCAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATGAAAGAAGAAAAATTGTGGCATTTATTGGTGGACTGGATTTGTGTGATGGGCGATATGATAATCCTTACCATCCTCTCTTTAGGACACTGCATACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTACATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGACCAACTTTGAGGAGCGCTGGTTAAGAGCTGCGAAACCTAAAGGGATAAAAAAGTTTACAAGTTCATATGATGATGCATTACTTAAGCTAGACAGAATAAAAGATGTTATCAGTTCATCTGATGATCTTCATCTTGATGAGGATAATAATCCTGCATCATGGCATGTTCAGATATTCCGTTCAATTGATTCAAATTCGGTCAAGGGATTTCCGAAGGATCCAAAAGATGCATCAAGCGTTAATCTGGTATGTGGGAAGAATGTACTGATTGACATGAGTATACATACAGCATATATAAAGGCCATTCGTGCTGCACAACATTACATTTATATTGAGAATCAATATTTCATTGGATCTTCATATAATTGGAGTCAATATAAAGATCTTGGTGCTAATAATTTAATTCCAATGGAAATTGCACTGAAGATTGCTGCAAAGATAAGGGCAAATGAGAGATTTGCAGTGTACATTGTTATTCCAATGTGGCCGGAGGGTGTTCCAACAGGTGCTGCCACTCAAAGGATTCTATTTTGGCAGCACAAAACAATGCAAATGATGTATGAAACAATTTACAAGGCTTTGGTTGAAGCTGGGCTTGAAGGAGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGTCTTGGCAATCGGGAGGCAGTAGATGTGTATGAGAATGTCACTGTGTCTGGAAATCCTCCACCAGCAAATAGTCCACAAGCAATTAGTAGAAACAATCGACGATTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTCATATTGGGGTCTGCCAACATCAACCAGCGCTCTATGGAAGGAACAAGAGACACTGAGATTGCAATGGGTGCATACCAACCTTATCATACCTGGGCAAGAAGACAGTTTTATCCACTTGGGCAGATCCATGGATATAGAATGTCACTTTGGGCAGAACATACAGGTACTATTGAAGACTGTTTTTCAGAACCAGAGAGCCTTGAGTGTGTTAGGAGGATTAGAACAATGGGTGAACTGAACTGGAAACAATATGCATCAAATGATGCAACAGAGATGAAAGGGCATCTACTCAAGTACCCTGTAGAAGTTGATAGAAAGGGTAAGGTAAGATCCCTTCCTGGTCACGATGAGTTTCCAGATGTGGGTGGAAAGATTATAGGATCATTTATTGCCATTCAGGAAAATCTAACCATTTGA | 3156 | 0.4144 | MDNSGSSQPPYGYPNPYLYTGNTPPYPPPDPYAPPPYPYPYPPNAPDTFNYSYPPSSLPPSAPYSSHTYLPPLHIPPPPHDSFAFSMPQSPNTYPPEWSNTGGEVPQNSDSYKPPAVSIYPPLDDRMSIVRLSETTNTLPLLTRSRSISNYIRDEFYGFSVYSPSDLDKEDPTRPSVQSDDSMGAHSLQIVPVQNKASLPVLLLHGNLDIWVHRAKHLPNMDMFHKTLGDVFGKLPVNVNKVDGTVSQKITSDPYVTVSVSNAVIGRTFVISNSENPVWEQHFYVPVAHHVAEVHFVVKDSDVVGSQLIGVVAIPAEKIYSGEKIHGSYPILNSSGKPCKPGAILRLSIQYIPIEKLITYHQGVGGGPEYHGVPGTYFPLRKGGMVNLYQDAHVPSGSLPNVKLNHGLYYNHGKCWNDIFEAIRAAQRLVYITGWSVWHKVRLVRDADNATDSTLGELLRTKSSEGVRVLLLVWDDPTSRSILGYKMDGVMATHDEETRRFFKHSSVQVLLCPRFAGKRHSWAKQKFAILYDGHTTTDGVVPFVLEFQNNFFLSNYQEVGTIYTHHQKTVIVDADAGNERRKIVAFIGGLDLCDGRYDNPYHPLFRTLHTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPKGIKKFTSSYDDALLKLDRIKDVISSSDDLHLDEDNNPASWHVQIFRSIDSNSVKGFPKDPKDASSVNLVCGKNVLIDMSIHTAYIKAIRAAQHYIYIENQYFIGSSYNWSQYKDLGANNLIPMEIALKIAAKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEAGLEGAFSPQDYLNFFCLGNREAVDVYENVTVSGNPPPANSPQAISRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPYHTWARRQFYPLGQIHGYRMSLWAEHTGTIEDCFSEPESLECVRRIRTMGELNWKQYASNDATEMKGHLLKYPVEVDRKGKVRSLPGHDEFPDVGGKIIGSFIAIQENLTI | 1051 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu9g00449 | 1051 | Pfam | Phospholipase D C terminal | 971 | 1041 | IPR024632 | - | |
Vimu9g00449 | 1051 | SMART | pld_4 | 561 | 596 | IPR001736 | GO:0003824 | |
Vimu9g00449 | 1051 | SMART | pld_4 | 897 | 924 | IPR001736 | GO:0003824 | |
Vimu9g00449 | 1051 | FunFam | Phospholipase D | 710 | 943 | - | - | |
Vimu9g00449 | 1051 | ProSiteProfiles | C2 domain profile. | 184 | 329 | IPR000008 | - | |
Vimu9g00449 | 1051 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Vimu9g00449 | 1051 | SUPERFAMILY | Phospholipase D/nuclease | 743 | 983 | - | - | |
Vimu9g00449 | 1051 | SUPERFAMILY | beta-sandwich domain of Sec23/24 | 7 | 998 | - | - | |
Vimu9g00449 | 1051 | Gene3D | C2 domain | 201 | 339 | IPR035892 | - | |
Vimu9g00449 | 1051 | Gene3D | Endonuclease Chain A | 403 | 678 | - | - | |
Vimu9g00449 | 1051 | SUPERFAMILY | Phospholipase D/nuclease | 372 | 660 | - | - | |
Vimu9g00449 | 1051 | PANTHER | PHOSPHOLIPASE D | 198 | 1041 | IPR015679 | - | |
Vimu9g00449 | 1051 | Pfam | C2 domain | 206 | 331 | IPR000008 | - | |
Vimu9g00449 | 1051 | Gene3D | Endonuclease Chain A | 709 | 943 | - | - | |
Vimu9g00449 | 1051 | MobiDBLite | consensus disorder prediction | 20 | 39 | - | - | |
Vimu9g00449 | 1051 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 204 | 354 | IPR035892 | - | |
Vimu9g00449 | 1051 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 561 | 596 | IPR001736 | GO:0003824 | |
Vimu9g00449 | 1051 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 897 | 924 | IPR001736 | GO:0003824 | |
Vimu9g00449 | 1051 | CDD | C2_plant_PLD | 201 | 352 | - | - | |
Vimu9g00449 | 1051 | SMART | C2_3c | 207 | 328 | IPR000008 | - | |
Vimu9g00449 | 1051 | FunFam | Phospholipase D delta | 201 | 347 | - | - | |
Vimu9g00449 | 1051 | Pfam | Phospholipase D Active site motif | 562 | 596 | IPR001736 | GO:0003824 | |
Vimu9g00449 | 1051 | Pfam | Phospholipase D Active site motif | 898 | 924 | IPR001736 | GO:0003824 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu9g00449 | Vimu-Chr9 | 5343469 | 5351527 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu9g00449 | 36 | 1051 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 65.814 | 0.0 | 1376 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu9g00449 | K01115 | - | gmx:100805294 | 1597.79 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu9g00449 | 9 | 5343469 | 5351527 | Vimu9g00449 | 9 | 5343469 | 5351527 | ECH |