Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00432 ATGAGCACACAGGTGCAGCAGCTAAGAAGGTTCAACTCAATGGAACGCAGGCCGAGGATGCTGAAGGACTTCCTCAGCGACAACCTAAACTCTTGTTCCTCAAGCGGTTTCAAATCACTTCCAAGAAAACCAACAAGCATGCACACCCTCATAGAAATGGAACTCAAATCATCTTCATCACCACCATCAAACTCACCCTTCCAGACACTCATGAACACCATAAGAAGCATCTCTTTCTTCACCTCCGTGAGAAAATCACCCTCCGTGCTTTCCCTTCCCAGAAGCCTCTCTCGCAAACTCTCATCGTCAAGGAGAAGAACAACAACAAGAAGCAGAAGCCAAGGATGCAACGATATCAGCATCACAACCGTGAAGATCAAGGACATCATGCGGTGGAAATCGTTCAGGGACATCGTCGAACCTCCCCCACCACCTTTGGATTTCATGGTGGACCCCACTGCCACAACCACCACCGCCACCTGGAGTATCAGCACTGGCTCTAGTTGGAGTGATAGCGACTTTTTAACCTCTTCTTGGGAAGATCCACAAAACGACAGCGTTGAAGCTGGTAAAAAATTTTCGTTTTCACCCCTCGTTGTCGGCAAGGACCCCATAGCCACGGAAGCTTTAACTTGCCAAGAAGAACAAAACAGTCCAGTTTCTGTTCTTCAGGTTGGAGAAGATGAATTTTCACCTTTTGATCAAAGCCTTGCCAATATTCAAAGGAGAAAGCAGAAGTTCATAGAAACAGTTCAGAAATTGGAGAGTCTTGCAAAACTTGACCTTGTAGACTTAGATCAATGCCTCTCATTGGATGAAAATTCTCTCTATGATGAAGAGTACGAAAATGATGATGATGATGATGATGATGACATTAGAGAAGAAGGTTGGAGTGAGGAAAAGGCAGAGCAACTGCTACATTGTGTTAAAGCAAGATGTTCGGCAGATGGTTGTAAAGACCATTTGGATACACTTCTGTTGGATTTTTTCAGTGAAGAACTGAGTGGAAATAGAAAGCAGTATAATGAAGAGGAGTTAAAAACTTTGAGAATAGCTGAGGATTGGATAAATGGATCATTTGCTTTTGATGCAGGGCTTGCTGATAAACAAGCTTACATCAAGGACATGGAAAAGAGAGATCAGTGGAATAGGTTTAAGGAAGAGCAAGAAAAACTAGCTTTTGAAATTGAGAAAGCTATATTTCATAGTTTGGTTGCTGATCTTGTTGACTCAGAAGGTTAA 1242 0.43 MSTQVQQLRRFNSMERRPRMLKDFLSDNLNSCSSSGFKSLPRKPTSMHTLIEMELKSSSSPPSNSPFQTLMNTIRSISFFTSVRKSPSVLSLPRSLSRKLSSSRRRTTTRSRSQGCNDISITTVKIKDIMRWKSFRDIVEPPPPPLDFMVDPTATTTTATWSISTGSSWSDSDFLTSSWEDPQNDSVEAGKKFSFSPLVVGKDPIATEALTCQEEQNSPVSVLQVGEDEFSPFDQSLANIQRRKQKFIETVQKLESLAKLDLVDLDQCLSLDENSLYDEEYENDDDDDDDDIREEGWSEEKAEQLLHCVKARCSADGCKDHLDTLLLDFFSEELSGNRKQYNEEELKTLRIAEDWINGSFAFDAGLADKQAYIKDMEKRDQWNRFKEEQEKLAFEIEKAIFHSLVADLVDSEG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00432 413 Coils Coil 237 257 - -
Vimu9g00432 413 PANTHER OS04G0572500 PROTEIN 4 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00432 Vimu-Chr9 5127379 5129359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00432 14 407 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 33.030 1.91e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00432 - - pvu:PHAVU_010G089700g 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00432 9 5127379 5129359 Vimu9g00432 9 5127379 5129359 ECH