Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00410 ATGATGACGACATATGGGTCACACCGAGAAAAAAAAGGAGCAGAACTTAAAAACTCAGATCTACTCAAGAAAAGGTCAAACGAGTCGTTACCAACCCTAGGAACAGACTCAGGAGGCTTCAGCGACTCTTCTGTGGCGGCGGCAGCGAGTGGGTCACACCGAGAAAAAAAGGAGCAGAGATTAAACTCAGATCTACTAAAATATAGCCTAAACGAGTCGTCATTGACCCTAGGAATGGGCTTAGGAGGCTTTGGTGACCTTGTCTGCGGCGGTAGCGGCGAGTGGGTCTCGTCAGAGGTGGGCGTGTGGGCTACATGCGCCGATGACGGTGGCGGCTCGTGGCAGATCCTCTCACGGTGCGACTTCAGGCGTTGTGATCGCCGTGACGGTGGTGGTCGGACAGCGGCGACAGTGCGACTGTTGTTGATAGGATATAAGAGACAGGACTTTTGCCTGTGGAGGGAGGTTAGGCTCTCGGTTACTGATTGTACCATACATTTGCTGATTGGGTTGTCTAAGTTAGGTTCCATATCCAGGAACCTAACAAATTGGTCCGACCTGTCGGATCGAGGTGGGGGTGCCGGATTTGAGAAGCTACCGTTTCAAGAAGCTATCGGATTTTCAAGAAAACTGCAGGATCTCCTTAGGAGAAGGCTTCCAGATCAAGAAGGGATCAAGAAAAAGGGTGGAGGCATGGAAGGAAGAATCAATACTTTGGATAGGTGGGCCAGCGAACATAAAAGGGAGCTAGCAGAATGGAGAACAAATATTCAAGAAATAAAAGAAATGCTGCAGAAATCCAAGAATCACATAAACGGCTCAGAAAAAAGTAAGAAAATTGTCAGGAAAGGAAAGAAAGAGGGAGAAACAGATAGGGGTGTTGTGGAAGATAGTCTGCTAGACATCAAGAAAGCCAAGAAACTTTCAGATGAAGAGGAGATGGAGGAAGACAGGGGTGCACAAAATTGGAGGCAGCAGGTAGAATTGGCCAGGTTTGAGGGGCTGGATCCATTGGGATGGATCTCTCAGGTAGAGAAGTTGTTTGACACCCCAAAATGTCACAGAGAAGGAGAGGCTCAGGGAGGCACAATCTATTGGTTCAGGGCCTGGAAAAATAAAACCAAGAACCTTTCTTGGAAAGGGCTGAAAGAGGCATTAATAATGGGGTTTGCAGGAAGAGATAGAGGCTCTGTTTTGGAGAAGAAAAGAGAGACGGAAGTTGCAGTTTTGAGTGTTGATGGTTTTGCAAGAATTAAAGGGCAAGATAGGAGAGAAGAAAATATATGTGGAGAGGAAGGCAATGATGAAAACTGTGATGGAGACATGGGTGTGACTGCTGCTGGAAAAGTTGAAAAAGCTGTTGTTTTTACTGCTGCAGATAAAGTTGCAAAAGTTGTTGTTTTTACTGCTGCTGAGAAAGTTGCAAAAGCTGCTATTTTTACGGCTGCCCAGGAAGTGGCAAAAAATATTGTTTCTAGGGAAGATAGTGGGGTAGGTGGTGATGTGTATGTCAAAACAGTGGAGAAGGGTGAAGACAGAGTAAAGAAAGCAGAACATGGTGGGAACATGGTGGCTATTATGGCTGGAAATAAAGTAGAAGATGCAGCTGACTTGAGTGGGGAAAAAATATGGTTGTCACAAACATACAAAACACCCGAAGACCAATGGCAGGGATATTTCTTTGCAGGACTACACTATAACATTCAGAGGAAACAGTTAGCTCAACATGATGATGATGAAGGAATTGGATGGTCAGATCAACAAGTTCTTTCCTTTTTAGCTTCTAGGATGAACAAATCTGGGCAAGGTGAGGGCTTCGCTAGGACTGCTGCTATAAAAATACAAAAAAGTGGTCACCAGGTCAGAAGGCAGTATAGAACAATCATATGGTCCATGGGAATTCTGGAAAAGAAGCAACTCTTAAAGGAGTCAACAATTCTTTCATATAGACCACCACCCAAGCCTCCAGACCTGAATTGGAGGGCAGCAGCCAGTGGGTTTGGGTTCCCTCCTATGATGAGGATGAGCCATGGGAACAAGCATTACTGTACCAACCTTGAGGGCAAGGTTGTTTTGCAGCAGGGGGTAATGATAGGATATAAGGTGATAGGTTATAATGGGTTTAAGAAAGGAGGGCAGTTAGGAGGGAAGAGTTGTTTGGCACTTAGTTAG 2172 0.4549 MMTTYGSHREKKGAELKNSDLLKKRSNESLPTLGTDSGGFSDSSVAAAASGSHREKKEQRLNSDLLKYSLNESSLTLGMGLGGFGDLVCGGSGEWVSSEVGVWATCADDGGGSWQILSRCDFRRCDRRDGGGRTAATVRLLLIGYKRQDFCLWREVRLSVTDCTIHLLIGLSKLGSISRNLTNWSDLSDRGGGAGFEKLPFQEAIGFSRKLQDLLRRRLPDQEGIKKKGGGMEGRINTLDRWASEHKRELAEWRTNIQEIKEMLQKSKNHINGSEKSKKIVRKGKKEGETDRGVVEDSLLDIKKAKKLSDEEEMEEDRGAQNWRQQVELARFEGLDPLGWISQVEKLFDTPKCHREGEAQGGTIYWFRAWKNKTKNLSWKGLKEALIMGFAGRDRGSVLEKKRETEVAVLSVDGFARIKGQDRREENICGEEGNDENCDGDMGVTAAGKVEKAVVFTAADKVAKVVVFTAAEKVAKAAIFTAAQEVAKNIVSREDSGVGGDVYVKTVEKGEDRVKKAEHGGNMVAIMAGNKVEDAADLSGEKIWLSQTYKTPEDQWQGYFFAGLHYNIQRKQLAQHDDDEGIGWSDQQVLSFLASRMNKSGQGEGFARTAAIKIQKSGHQVRRQYRTIIWSMGILEKKQLLKESTILSYRPPPKPPDLNWRAAASGFGFPPMMRMSHGNKHYCTNLEGKVVLQQGVMIGYKVIGYNGFKKGGQLGGKSCLALS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00410 723 MobiDBLite consensus disorder prediction 25 48 - -
Vimu9g00410 723 MobiDBLite consensus disorder prediction 1 58 - -
Vimu9g00410 723 Coils Coil 243 270 - -
Vimu9g00410 723 MobiDBLite consensus disorder prediction 266 292 - -
Vimu9g00410 723 MobiDBLite consensus disorder prediction 8 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00410 Vimu-Chr9 4922303 4924843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00410 567 637 CAMTA Transcription Factor Family AT5G09410 41.667 6.56e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00410 K21596 - vra:106759313 187.963