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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu9g00394
ATGAGTTTTGGGGGTTTTCTTGACAACAAATCGGGTAGTGGCGCAGCCAGACACGACCTTTTGGATATTCCTTACAACAACGTTACCACCACCAACCATAACAACACCAACGAAGACGATAGAATGCCCTTTGGTGCAATCTCTCAGCCACGCCTGGTGACCACCACCACTCCAACCCTGGCCAAATCCATGTTCAACTCCCCAGGACTATCTCTGGCACTTCAAACCAATATAGATGGACAAGAAGATGTGAATAGAATGGTCGAAAATAGCTTCGAACCAAACGGTTTGCGAAGAAGCAGAGAAGAAGAACATGAAAGCAGATCTGGAAGCGACAACATCGACGGCGCTTCCGGCGATGAACAAGATGCCGCCGACAACCCTCCGAGGAAAAAACGCTATCACCGACACACCCCTCAGCAGATACAAGAACTTGAAGCGTTGTTCAAGGAGTGTCCTCATCCAGATGAGAAACAAAGACTCGAACTTAGCAAGAGGCTGTGCTTGGAAACTCGACAGGTGAAGTTTTGGTTCCAAAACCGGAGAACCCAAATGAAGACCCAGTTGGAGCGGCACGAGAACACTTTGCTGAGGCAAGAGAACGACAAGCTGAGAGCGGAGAACATGTCTATCAGGGACGCAATGAGGAACCCCATGTGCTCCAATTGCGGTGGACCTGCCATCATCGGCGAGATTTCGCTCGAGGAGCAGCACCTTCGGATTGAGAACGCCCGGTTGAAGGACGAGCTCGATCGCGTGTGTGCACTCACGGGCAAGTTTCTGGGTCGCCCCGTTTCTTCGTTACCGAATTCAAGTTTGGAGCTTGGCGTTGGGGGGAACGGGTTTGGTGGAATCAGCATTGGCACTACATTGCCTTTAGGACAAGATTTTGGGATGGGAATGTCGATGTCTGTGTCTAACAACCCTTTGGCTATGGTTTCTCCCTCTAGTACCCGACCAACTTCTGTCGTGGGTGGGTTTGATAGGTCCATGGAAAGGTCCATGTTTCTTGAGCTTGCTTTGGCTGCCATGGATGAGTTGGTGAAGATGGCTCAAACTGGGGAGCCTCTTTGGGTGAGGAATGTTGAAGGTGGGAGGGAAATCATGAACCATGAGGAGTACGCGAGAACCTTCACTCCTTGTATTGGTTTGAGACCAAATGGGTTTGTGTCCGAAGCCTCTAGGGAAAATGGAATGGTCATCATTAACAGTTTGGCACTTGTTGAGACTCTCATGGACGCGAATCGATGGGCAGAGATGTTTCCTTGTATCATTGCAAGAACCTCCACTACTGAAGTGATATCTAACGGGATAAATGGAACAAGAAATGGAGCACTTCAATTAATGCATGCTGAACTTCAAGTTCTTTCGCCTTTGGTTCCTGTGCGTGAGGTAAATTTCCTAAGGTTTTGCAAGCAGCACGCAGAAGGGGTTTGGGCAGTGGTGGATGTGTCCATAGATAGCATCAGAGAAAGTTCAGGAGCACCATCCACTTTTGTCAACTGTAGGAGGCTTCCTTCTGGTTGTGTTGTGCAAGACATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCACGCAGAATACGATGAGAGCCAAATTCACCAGGTTTATAGACCATCGTTGAACTCAGGCATGGGGTTCGGTGCTCAACGTTGGGTGGCTACCCTTCAACGCCAATGCGAGTGTCTTGCAATCTTAATGTCCTCAGCAGCACCCTCTCGAGACCATTCAGCAATAACGGCGGGGGGAAGGCGGAGCATGGTGAAGCTGGCGCAGCGAATGACCAACAACTTCTGCGCCGGCGTGTGTGCCTCCACGGTGCACAAGTGGAACAAGCTCAACCCCGGGAATGTGGATGAGGACGTGAGGGTGATGACAAGGAAGAGCGTGGATGATCCCGGCGAGCCGCCGGGGATTGTGCTGAGCGCAGCCACCTCCGTTTGGCTCCCCGTGTCGCCGCAGAGGCTCTTTGACTTTCTTCGGGATGAGCGCCTCCGAAGCGAGTGGGACATACTCTCCAACGGCGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCACGGCAACTGCGTCTCTCTCCTCCGAGCCAGTGCCATAAACTCCAGCCAGAGCAGCATGCTTATACTACAGGAGACATGCATAGACGAGGCGGGGTCACTTGTGGTCTACGCGCCGGTGGATATTCCGGCCATGCATGTTGTTATGAACGGTGGTGATTCAGCTTACGTGGCACTGTTGCCATCGGGATTTGCTATTGTTCCTGATGGGCCTGGGTCTCGTGGGTCACAGAATGGGCCTACTGCCGCAACAAACGGTGGTGATAATGGTGCTGCACGCGTGAGTGGGTCCCTCTTAACGGTTGCTTTTCAGATCCTTGTGAATAGTCTTCCTACAGCCAAGCTCACAGTAGAGTCCGTGGAAACCGTGAACAACCTCATATCATGCACCGTTCAAAAAATCAAAGCTGCACTGCACTGTGAAAGTTAA
2499
0.5162
MSFGGFLDNKSGSGAARHDLLDIPYNNVTTTNHNNTNEDDRMPFGAISQPRLVTTTTPTLAKSMFNSPGLSLALQTNIDGQEDVNRMVENSFEPNGLRRSREEEHESRSGSDNIDGASGDEQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALTGKFLGRPVSSLPNSSLELGVGGNGFGGISIGTTLPLGQDFGMGMSMSVSNNPLAMVSPSSTRPTSVVGGFDRSMERSMFLELALAAMDELVKMAQTGEPLWVRNVEGGREIMNHEEYARTFTPCIGLRPNGFVSEASRENGMVIINSLALVETLMDANRWAEMFPCIIARTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPSTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQVYRPSLNSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMVKLAQRMTNNFCAGVCASTVHKWNKLNPGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINSSQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGSQNGPTAATNGGDNGAARVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES
832
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu9g00394
832
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1
127
829
IPR042160
-
Vimu9g00394
832
SMART
START_1
338
563
IPR002913
GO:0008289
Vimu9g00394
832
MobiDBLite
consensus disorder prediction
91
138
-
-
Vimu9g00394
832
SUPERFAMILY
Bet v1-like
590
825
-
-
Vimu9g00394
832
Gene3D
-
117
204
-
-
Vimu9g00394
832
MobiDBLite
consensus disorder prediction
764
779
-
-
Vimu9g00394
832
Coils
Coil
182
214
-
-
Vimu9g00394
832
ProSiteProfiles
START domain profile.
329
566
IPR002913
GO:0008289
Vimu9g00394
832
FunFam
Homeobox-leucine zipper protein HDG1
118
204
-
-
Vimu9g00394
832
Pfam
Homeodomain
131
186
IPR001356
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu9g00394
Vimu-Chr9
4677195
4683506
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu9g00394
1
832
Homeobox Transcription Factor Family
AT3G61150
65.755
0.0
1048
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Vimu9g00394
START
2.2e-56
CL0209
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu9g00394
K09338
-
gmx:100811873
1470.68
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