Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00383 ATGCCTCGTGGAACGCTTGAAGTTATTTTGATCAGCGCCAAAGGCCTTGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAGGACACAGGAGCACAAGAGCACTGTGCAAGAAGATTCTGGATCCAAACCTCAATGGAACGAGAGCTTTCTTTTCACTGTTTCTGACAGTACTTCTGAACTGAATCTCAAGATCATGGATAAAGACAACTTTACTAAGGATGATTTTCTTGGCGAGGCAAACATTGATTTAGGTCCACTGTTTGAAGTGGGTAGCCTTCCAGAAACTGTTCACAAGGTTGTGAAGGACGAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTCACTCCTGAGAGAAACGAGGAGCAGGAATACAGTGTAGGGGAAGAGAGCTATGGTGGATGGAAAGAATCAAGTGGGGAATTCTAG 450 0.4333 MPRGTLEVILISAKGLDDNDFLSSIDPYVILTYRTQEHKSTVQEDSGSKPQWNESFLFTVSDSTSELNLKIMDKDNFTKDDFLGEANIDLGPLFEVGSLPETVHKVVKDEEYCGEIKVALTFTPERNEEQEYSVGEESYGGWKESSGEF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00383 149 MobiDBLite consensus disorder prediction 127 149 - -
Vimu9g00383 149 Gene3D C2 domain 2 125 IPR035892 -
Vimu9g00383 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Vimu9g00383 149 Pfam C2 domain 4 95 IPR000008 -
Vimu9g00383 149 PANTHER C2 DOMAIN-CONTAINING 1 136 - -
Vimu9g00383 149 SMART C2_3c 5 102 IPR000008 -
Vimu9g00383 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 127 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00383 Vimu-Chr9 4490833 4492778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00383 4 94 C2H2 Transcription Factor Family AT4G21160 38.462 3.48e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00383 - - gmx:100500006 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00383 9 4490833 4492778 Vimu9g00383 9 4490833 4492778 ECH