Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00309 ATGGCCAACAAGGGAAGTCCAAAGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATACAATGGAGTTATGGGATATTCTGGGCACCTTCAACTACTGAAGAAAGTTGCTATGCTGCTATCAACATGTCTCTTTTCTGCAAGCTTCACTTCCTCTTGGTAAGTCTTGAATCCCAAATTTTGATTGGTGAAAAACTGACATGGAAGTGTGCAAGAGAAAGATGTGAATGGGTGCTGGAATGGAGAGAAGGGTACTATAATGGAGACATTAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAACTGAAAGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAGTCACAATCAAAGTTTGCCTGGAAAAGCACTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCCTCAATTCAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTTATTGAGATAGGTTCTACTGAACTGGTTATCGAGGACCCTAATCTCATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAGGGTGACCGCAGGGTGTTTGATGCAATGGCTCTGGAGAATCCATGTTCCCTTGAAAAGAAAATCAAATTTGATAATCATGATCCTGTCAATGGATTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCATCATTACCCTATGGAATCCATGATTGATGGTATGCATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGCATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTATAAACCAAAGAGAGGCTTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACACTTTGTGCTATTTTGGGTAACTCATCAACATTTAAGGCAAACCCTTATGCCGGTAACTCAAACTATAGATCGAGTTTCGCAAAATGGAAGAAAGGTAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTTTTCCCGTAAGTCTCAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGATGGTGATGATTTCATGGGAAAAGCATTAACTGATAAGAAAAGAGAAGTTAAAAACTTCCATTTTGCTCCATCTTCTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCGGATGCTGAAGCAAGAACCAGGAGAAAATGCCCTGATGTTCTAGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAAATGGACACAGAACTAGAAAGACTTGTTTGTGAAGAAGCAAAGGCATTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTCTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGTGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGAATGATCAAAGAAGCACTCTGGAAAGCATATGGAAATGTTTGA 2064 0.4055 MANKGSPKHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEESCYAAINMSLFCKLHFLLVSLESQILIGEKLTWKCARERCEWVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFSHNQSLPGKALEIGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDRRVFDAMALENPCSLEKKIKFDNHDPVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDGMHGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYKPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNYRSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENDGDDFMGKALTDKKREVKNFHFAPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADAEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERLVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00309 687 Coils Coil 530 550 - -
Vimu9g00309 687 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 242 IPR025610 -
Vimu9g00309 687 PANTHER TRANSCRIPTION FACTOR TT8 11 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00309 Vimu-Chr9 3749372 3754577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00309 15 683 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 36.850 1.01e-109 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00309 - - gmx:100783746 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00309 9 3749372 3754577 Vimu9g00309 9 3749372 3754577 ECH