Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00301 ATGGCAAAGAAGTCCCAAAGACGCCATGTGCGGTTTGAGAAAGATAAATCAGGCTGCATGTGGGGTTTTATTAGTATGTTTGATTTTCGACATGGTCATTCCACTAGGAAGATGATTGCAGACAAGAGGCGAAACAGCAAACATGCTGTTGGGGCCATAAATTCTAAGACTAAGTTCGAGAATAGAAATTTGGATGAAGTTTATCAATCCAGTTCGGACAGTGGAGAGAGTAGAAGACCAACAATTGTGACTGCTGCTAATAAGCCTAGCGTGAAGAAACTCATTGAAGAAGAGATGTTCATTGATCAGAATAAAATGAAGGATACAGATAGTGCTCAAATAGAATCAAAGGAATCCAAATTACGGCGTGATGTCCTCTTGAAGTTAGATTCCAAAAGGAAAAAGAAATTTTACAAGAAAAACTGTGATAAGGACATCAATGATTTAAATTTGGATACAACCTTGAAATCTGAAATCACACATGAGAAGCACTCAAGGAAACAATCTAAAGATAATCTTGATCTGGATAAGATGATTGCAGAGTTTTGCCATCTAAAAGATGTTTGTTCAATGATGCATGGCAATGATATAGAAGTAGAAGTTGAAGCACAATCAAACCAGAAGCAAGCTATTTCTGAAAATGCAAAAGAAGCAATTTGTGAATTTGTGAATCAGATGGTATTAAATGGAAAAGATCCGGCTGAAGCCAGAAAATTCCTTTGCTCCCATCAACTTGTGGAAGCTATTGAGCTTCTAAGTTCAGATAAGGAATTGTTTCTTTCACTTCTACAAAATCCGAATTCACTGTTGTTGAAATGTGTTCAGGAGTTTAGGAATTCTCAGGGAACAAATGAAAAAGAATACGGTCCAGTAGTTGGTTCCAACTTCTCCGAACAAGATCATGGCAACCTGAAACAAAATGGGGATCTAGTCAACCACAAGAAGCATAACTTTTTCAGAAAAAAGATGAAGTCTCATTCAAAAAGTTCAGCAAATGAGAACGGGAACACTAATTTATCAAGTATTGTTATTTTGAAGCCTGGGCAGATGGGCTGGCAAAATTCTGAAACTGGAAAAAACCTTGCCTCTTATCAAGATTCATATGATGTTGTCAAATACAATGGTCCTTCTGTGAGAGGTAGTTCACATTTTTCTCTCACAGAGATAAAAAAGAAATTAAAGCATGCTATGGGAAGGGAGAGACATGGAAACCCTGAAGGGATCTCAAAAAGACACCCTGCTGCCGAATGTCAAAATAGGAGGCCTAGCAGCAAAGTCATTGGTAAAGACAATGTTGGAATGATATCTCCTAATAAAGATCACTTTTTCATTGAAAAAATTGGAAGACCTGCCACTGGTGTTATGAAAGGAGACAAGCCTAGTACAACTAAAGATTTTGAATTGACAATGGAACATGAAAATGGTAGTCGTCCAAAACAAAGGGTTTCTAACTTATATATTGAGGCTAAGAAACATTTGTGTGAAATTGTAGGTAATGGAGATGAGAAAATAGACTTGTCAAGTAGGCAGATTTCTAGAACCCTTGGCAAAATACTATCTCTTCCTGAGTACAGCTTTTCTCCCTTTGGCAGTCCTAGAAGGGATTGGGAGCATCATTCAGTAACTGCACAGAAAATATTTTCCACTTCAGATAAGATTTGGGTGGGTAATAAGGATAATGTGTCTCCCAAACAAGAATCCTCTGTTGGTCATTTGGATCAGGAAATAGACAATTCAGAGGAGCAGTCAATAATTTGTGACGAAATCTCTAATAACAAAGTTCAAGAAAATAAGTCAGACTCAAACGTTGCAAATGACCGTGGCCATGTTGATGAAACACAAAATCTTTGTCCTGATAGAGATGAGATAGTTACTGGAGGTGATGTAGAATCTGCACCAGAGGTGAATGTTTTGGAATCTTCCTCACAACCAGTTGACCTCAGTGTAGGAAAGGAATACCAAAACTATGGTCTCTCAGAAATTTCTGATTGTGCAAAATGCTCTCAATGTTCAAAGCAGGATGTAGAAAAAGAACACAAACCAACATCTCCTCTATTATCTCCACCCCACCATTCCACCACCAAAGAAATTACAGATGCATCTGGGCGGCCAAGTCCCATATCTGTTCTTGACACACCGTTCTTTGAAGACGAAGTTCAGCCTGTTGAAGCATCAGTCCGACCACTGCAATTTGGAGAACAATACTCTTCACCTTTGCATGAAATCAATAGAGAAAAGTATTGTCTTAAAGAAAATGAATGGATATATGATTACATCAAAGCAATTCTGCAAACCTCTGGATTGACTATAGATCAATTGTCAATGAAATGCCTTTCCTCAGACAAGATCCTAGATCCTTCCTTGTTTGATGAGGTAGAGTTACCAAACCAGATTTGCCATGATCAGAAGCTCATTTATGACTGTGCCAATAATGTTCTCATGGAGGTTTGTCAGAATTACTTCAGGTTCTCACCTTGTGTGTCATTCATAAAACCTGGCATAAGGCCTTCTCCAAACATGATGAAGGTTATTCTCAAAGTCTGGGAAGGAGTGTGTTGGCATTTCCTTCCCTTGCCCCCACCCCGTACCTTAGACAAAATTATTAAAAAGGACATGGATAAAAGTGGAACATGGATGGACCTTAGACTTGAAGCTGAAACCATTGGTTTTGAAATGGAAGAAGCCATTCTTGCAGAACTGATGGAAGATACAATACTAAGCTGTGTAAGCAAAAGTTCAGAAGGTGATTGTTCTCAGCTTGAATTTGAATATAAGGACAAAGAAAACACCAAAAATGTGTAA 2802 0.3819 MAKKSQRRHVRFEKDKSGCMWGFISMFDFRHGHSTRKMIADKRRNSKHAVGAINSKTKFENRNLDEVYQSSSDSGESRRPTIVTAANKPSVKKLIEEEMFIDQNKMKDTDSAQIESKESKLRRDVLLKLDSKRKKKFYKKNCDKDINDLNLDTTLKSEITHEKHSRKQSKDNLDLDKMIAEFCHLKDVCSMMHGNDIEVEVEAQSNQKQAISENAKEAICEFVNQMVLNGKDPAEARKFLCSHQLVEAIELLSSDKELFLSLLQNPNSLLLKCVQEFRNSQGTNEKEYGPVVGSNFSEQDHGNLKQNGDLVNHKKHNFFRKKMKSHSKSSANENGNTNLSSIVILKPGQMGWQNSETGKNLASYQDSYDVVKYNGPSVRGSSHFSLTEIKKKLKHAMGRERHGNPEGISKRHPAAECQNRRPSSKVIGKDNVGMISPNKDHFFIEKIGRPATGVMKGDKPSTTKDFELTMEHENGSRPKQRVSNLYIEAKKHLCEIVGNGDEKIDLSSRQISRTLGKILSLPEYSFSPFGSPRRDWEHHSVTAQKIFSTSDKIWVGNKDNVSPKQESSVGHLDQEIDNSEEQSIICDEISNNKVQENKSDSNVANDRGHVDETQNLCPDRDEIVTGGDVESAPEVNVLESSSQPVDLSVGKEYQNYGLSEISDCAKCSQCSKQDVEKEHKPTSPLLSPPHHSTTKEITDASGRPSPISVLDTPFFEDEVQPVEASVRPLQFGEQYSSPLHEINREKYCLKENEWIYDYIKAILQTSGLTIDQLSMKCLSSDKILDPSLFDEVELPNQICHDQKLIYDCANNVLMEVCQNYFRFSPCVSFIKPGIRPSPNMMKVILKVWEGVCWHFLPLPPPRTLDKIIKKDMDKSGTWMDLRLEAETIGFEMEEAILAELMEDTILSCVSKSSEGDCSQLEFEYKDKENTKNV 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00301 933 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 908 - -
Vimu9g00301 933 Pfam Protein of unknown function (DUF3741) 224 268 IPR022212 -
Vimu9g00301 933 MobiDBLite consensus disorder prediction 399 431 - -
Vimu9g00301 933 MobiDBLite consensus disorder prediction 399 418 - -
Vimu9g00301 933 MobiDBLite consensus disorder prediction 686 701 - -
Vimu9g00301 933 Coils Coil 201 221 - -
Vimu9g00301 933 Pfam Domain of unknown function (DUF4378) 757 903 IPR025486 -
Vimu9g00301 933 MobiDBLite consensus disorder prediction 678 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00301 Vimu-Chr9 3654775 3658645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00301 1 891 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.579 2.47e-99 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00301 - - gmx:102667950 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00301 9 3654775 3658645 Vimu9g00301 9 3654775 3658645 ECH
Vimu6g00533 6 6497235 6504892 Vimu9g00301 9 3654775 3658645 PCT