Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00287 ATGGAAACTTTCACGGCTCTATTGTTGTTAACGGCGATCACGGCTTACTTGATATGGTTCACTTTCATCTCACGGTCGTTGAAGGGTCCACGTGTCTGGGCCTTATTGGGCAGTCTCCCGGGCCTCATAGACAACTGTGACCGCTTGCATGACTGGATCTGCGACAACCTACGCGCGTGTGGCGGCACTTACCAGACTTGCATCTGTGCAATCCCTTTCCTCGCCAAGAAGCAAGGTCTCGTGACTGTGACATGCGACCCGAGGAACTTGGAGCACATACTGAAGACCCGTTTCGACAATTACCCCAAAGGCCCCACGTGGCATGCTGTCTTTCATGATCTTTTGGGTGATGGGATCTTTAACTCTGACGGCGACACGTGGCTGTTCCAGCGCAAGACTGCAGCACTGGAATTCACCACCAGGACATTGCGTCAAGCCATGGCTCGATGGGTGAGCGGAGCCATCAGCCGCCTCTGCTTGATCCTGAAGAAAGCTCATGATCGAGCTGAACCCATTGATCTGCAAGACCTAATGCTCCGTCTTACTTTTGACAACATTTGTGGGTTAGCTTTTGGACGAGACCCACAAACATGTGTGTCGGGTTTGCCTGATAACCGTTTTGCAACTGCTTTTGACAGAGCCACCGAAGCCACACTTCAGAGGTTCATTTTGCCAGAGGTGTTGTGGAAAGTGAAGAAATGGCTGCGGCTTGGAATGGAGGTGAGCCTGAGCCGAAGCCTTGTCCACGTGGACGACCATTTGTCGAATGTTATTGAGAAACGCAAGGTGGAATTGCTGAATCACCAGAAAGATGGGAATCTTCATGATGACTTGTTGACTAGGTTTATGAGAAAGAAAGAATCGTACACAGACAAGTTTCTACAACAGGTGTCACTGAATTTTATCCTAGCTGGACGCGACACGTCATCGGTAGCTCTGTGCTGGTTTTTCTGGTTGGTGATGCAGAATCCCAAAGTGGAGGAGAAAATTCTGCGTGAAATTTGTACAGTCTTGATGGAGACACGTGGCGATGACATGGCAAAATGGTTGGATGAGCCGTTGGCCTTTGAGGAAGTTGACCGTTTGGTTTATCTCAAGGCAGCATTGTCTGAGACACTGAGGTTGTACCCTTCTGTGCCGGAGGACTCAAAGCATGTGGTGGCCGATGACCTGCTGCCGGACGGCACGTTTGTGCCGGCGGGGTCGTCGGTGACGTATTCCATTTATTCAGCGGGGAGGATGAAGTCCACGTGGGGTGAGGATTGCATGGAGTTTAGACCTGAGAGGTGGTTGTCATCGGATGGGACAAAGTTCATCACGCATGACTCTTTCAAGTTTGTTGCTTTCAATGCTGGTCCAAGAATATGTTTGGGTAAGGATTTGGCTTACCTTCAGATGAAGTCCATTGCTGCTGCGGTGCTGCTCCGGCACCGCCTTGAACTGGTGCCTGGCCACCTGGTGGAGCAAAAGATGTCGCTCACTTTGTTCATGAAAAATGGACTCAAGGTCAATGTCCATGAGAGGGACTTGAGAGGGGTCATTATAAGTATACAAAAAGAAAAGGAGGGAGATGCTGATTTTAGAATAGATGGAGCAGAGTGTGTTGGAGGCTTCGGCTTGTGGAGTGAAGTTCGGAGGATGAAAATTCAGATACCGGAGCTTTAG 1665 0.4985 METFTALLLLTAITAYLIWFTFISRSLKGPRVWALLGSLPGLIDNCDRLHDWICDNLRACGGTYQTCICAIPFLAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSGAISRLCLILKKAHDRAEPIDLQDLMLRLTFDNICGLAFGRDPQTCVSGLPDNRFATAFDRATEATLQRFILPEVLWKVKKWLRLGMEVSLSRSLVHVDDHLSNVIEKRKVELLNHQKDGNLHDDLLTRFMRKKESYTDKFLQQVSLNFILAGRDTSSVALCWFFWLVMQNPKVEEKILREICTVLMETRGDDMAKWLDEPLAFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVADDLLPDGTFVPAGSSVTYSIYSAGRMKSTWGEDCMEFRPERWLSSDGTKFITHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLELVPGHLVEQKMSLTLFMKNGLKVNVHERDLRGVIISIQKEKEGDADFRIDGAECVGGFGLWSEVRRMKIQIPEL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00287 554 CDD CYP86A 67 501 - -
Vimu9g00287 554 Pfam Cytochrome P450 81 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PANTHER CYTOCHROME P450 19 503 - -
Vimu9g00287 554 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 FunFam Cytochrome P450 21 511 - -
Vimu9g00287 554 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu9g00287 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vimu9g00287 554 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00287 Vimu-Chr9 3497797 3499488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00287 1 523 Cytochrome P450 AT2G45970 77.333 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00287 K15398 - gmx:100779986 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00287 9 3497797 3499488 Vimu9g00287 9 3497797 3499488 ECH