Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00266 ATGGGAGGCATAAGTAAAACTACAATTGCTAGATTAGTCTATGAAAAAATTAAAGAGAAATTCACGGATTGTTGCTTTCTTGAAAACATCAGAGTTCTTTCTCATCTTGGTGTAAAAATCAATGATTTTTATAATCTTTATGATGGGAAAAAGATAATAGCAAACTTTTTAAGAAACAAAAAGGTACTTCTTGTTCTTGATGATGTAAGTGACAAAAGACAATTGGAGAATTTAGCTGAAAAGCGAGAATGGTTTGGTCCAGGAAGCAGACTAATAATCACAACTAGAGATGAGCACTTGCTAAAGACATTGGTTCTTGAAGGTTGCACCAGTTTAACTGAGGTTCATCCATCCCTTGTACGCCACAAGAAACTTGTTAAGTTGAATTTAAAACACTGCAAAAAGCTCAAAACTCTTCCAAGGAAAATGGAGACGAGTTCCTTGAATGATTTAAATCTTTCTGATTGTTCTCAATTTAAACATCTTCCAGAGTTTGTGGAAAGCATGGAACATTTGTCAGTGCTTTCTTTAAAGGGGACTGCTATAACATGTTAG 555 0.3423 MGGISKTTIARLVYEKIKEKFTDCCFLENIRVLSHLGVKINDFYNLYDGKKIIANFLRNKKVLLVLDDVSDKRQLENLAEKREWFGPGSRLIITTRDEHLLKTLVLEGCTSLTEVHPSLVRHKKLVKLNLKHCKKLKTLPRKMETSSLNDLNLSDCSQFKHLPEFVESMEHLSVLSLKGTAITC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00266 184 Gene3D - 1 101 IPR027417 -
Vimu9g00266 184 Gene3D Ribonuclease Inhibitor 102 184 IPR032675 -
Vimu9g00266 184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 135 IPR027417 -
Vimu9g00266 184 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 103 IPR044974 GO:0006952
Vimu9g00266 184 Pfam NB-ARC domain 30 104 IPR002182 GO:0043531
Vimu9g00266 184 SUPERFAMILY L domain-like 102 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00266 Vimu-Chr9 3214345 3218415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00266 90 182 WRKY Transcription Factor Family AT4G12020 40.860 3.75e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00266 - - ahf:112733298 142.895