Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00264 ATGAATCACACACTGCCTTACCCTACGAAATTGAAAACCCAATCTACGGTGACCCTGCCCAGGTCCTGCCGTGACGCGGCCGCTGCTCACCGTGACTCTGACATTTGTGGCCTAAGCGAGTCGTCGAGGGTCCCTGCCACATTTGCTATTGCTCCAATCGTCCTTGTCGTGGTTGTTGCTGCATCGTTTGTCGAGGGAATCTGCTGTTCGCTGCCGCACCGACCGTCAAGGAATTTGATGGAAACTAAGGAAAGATTGTTGCTTTCGAAGGGTCACTCAACTGCACTCTTTTACTGGGTCGCTCAACTTATAGCCTCTGTTATGGCTTGCCTTGTTCTAAGAGGCATTGTTGTTGGCATGAAGCTGCATATCTTTTGTGGCATGAGGCCATCAAGTTTTGCAGCCTATGGCCTTGTGGATTTGAACATGCCTAATAGTAGCATCAACTGTTTATGGGAAGACCGCAAGCATTTCCCATGTCTAAAAAAAATGGATTTGAGTAACTCCAAATATCTTAGGGAGACTCCTGATTTTAGTGGGGTCCCAAGCCTTGAGCGTCAGGATCTTTCAGGATGCACAGATTTATCATTTCAGCTTGCTTTCTTGAGTTTAAGAAATTGCAGCAATCTCATAAGCATCGAATTTCACAATGGATTTAGTCCAAGTTCCTTGAGAGTTCTACATTTCTCTGGTTGCACTAAACTTGAAAACACCCCAGATTTTACATGGACAACAAATCTTGAGTACCTTGATTTCGGTGGATGTACAAGTTTGTCCTCGGTTCATGAATCTATTGGAGTCCTTGCAAAGCTTACATTCTTGAGTTTGAGAGACTGCACAAGCCTTGTTAGTATACCTAGCAACAATAATATCATGAAATCTCTTCAGACTCTAGATTTCTCTGGCTGTTTTCAATTTACTGATTATTCCTTAGGCAATAATCATCAAGTACAAAAGGGTTGGCTTTTATGGGCTGGAGTTGGACTTGTTGGTTCCATAATTGCCACTTCATTGACCAGAGTTGTTGTGTCTTCCTTCAGTGGAGAAACCCCACAAAGAGAGCATGGGAGGAGGCAATTTAGGGTCACCGATTTTCAAATAGCATTAGTATTGAAACACTGA 1122 0.4367 MNHTLPYPTKLKTQSTVTLPRSCRDAAAAHRDSDICGLSESSRVPATFAIAPIVLVVVVAASFVEGICCSLPHRPSRNLMETKERLLLSKGHSTALFYWVAQLIASVMACLVLRGIVVGMKLHIFCGMRPSSFAAYGLVDLNMPNSSINCLWEDRKHFPCLKKMDLSNSKYLRETPDFSGVPSLERQDLSGCTDLSFQLAFLSLRNCSNLISIEFHNGFSPSSLRVLHFSGCTKLENTPDFTWTTNLEYLDFGGCTSLSSVHESIGVLAKLTFLSLRDCTSLVSIPSNNNIMKSLQTLDFSGCFQFTDYSLGNNHQVQKGWLLWAGVGLVGSIIATSLTRVVVSSFSGETPQREHGRRQFRVTDFQIALVLKH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00264 373 Gene3D Ribonuclease Inhibitor 125 220 IPR032675 -
Vimu9g00264 373 Gene3D Ribonuclease Inhibitor 221 316 IPR032675 -
Vimu9g00264 373 SUPERFAMILY L domain-like 134 327 - -
Vimu9g00264 373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 128 210 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00264 Vimu-Chr9 3198390 3200824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00264 130 309 WRKY Transcription Factor Family AT4G12020 29.327 1.14e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00264 - - var:108332841 335.495