Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00261 ATGAGAGTTGAAGTAGAAATAATTTCTAGAGAAGATATTAGACCTTCTTCTCCCACACCCTCTCACCTTAGAGTCTTCAGCCTTTCCCTTTTGGATCACCTTATCCCATCGCCATATGCTCCAATAATCCTGTTCTACAATTCACCTAAGAGTAACACAACTTACCTTTCTGAAGTCCCCAAGAGGTTACAATTGCTGAAAAAATCTCTATCAGAGACACTAACCAAATTCTACCCTCTAGGTGGAAAAATCAAAGAGGATCTGTCCATTGAGTGCAATGATGAAGGTGCTAATTTTGTGCTGGCCCGAGTGAAATGTCCTCTAGATGAATTTCTAGTCCAACCTCAGGTAACCGTACTACACAAGTTTCTTCCTGTTGATCTTGTGTCTGAAGGACCAAATTCAGGAACCTATGTGACTAACATTCAAGTGAACATCTTTGAATGTGGGGGAATTGCCATTGGCATGTGCATTTCTCATAGGATCCTAGATGGAGCTGCACTAAGCACCTTTATCAAAGGGTGGACAGAAAGGGCCAAGGGCTGTAACCAATCTACCCAACCAAATTTCATAGCACCTTCTCTCTTCCCCACTAACAGTCCATGGTTTAGAGACTTATCTATGTGGATGTGGGGTTCCTTGTTCAAACAAGGCAAGTGGGTCACAAGGAGGTTTCTGTTTAGAAACTCAGCTATTGCCACAGTCAAGGCTCAAACACCAGGCACAGAAAATTCCACACGTCTGCAGATGGTTTCTGCTATGCTGTGGAAGTCCCTCATGGGAGTGTCCAAGGCACGGTTTGGCACCCAAAGGCCTTCTTTTGTTACTCATCTGGTGAACCTGAGGAGAAAAATGGACGAGGCTCTTTGTCCTGAACATGCTATGGGAAATCTTCTTTGGTTGGCTGCAGAGAGTGTGGATGATAATGAGATGGGATTGGAGGAGTTGGTGGGGAAGTTGAGGACTGCAATATCAAGAGTAGATAAGGAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAGGCCAACTATGCAGGAGAGTCTTAGGGCAATAGGTGAGATGGGATCAAAGAGTGAAGTGGATTATTTTGGGTTTAGTAGTTGGTGCAATTTTGGGTACTACGAGGCTGATTTTGGGTGGGGAAAACCCACATGGGTGAGTGGTGCTGGTTCAATTGACTCAGTTTCAATGTTTATGAATCTTATCATCCTAGTGGACACAAGGTTGGGAGATGGCATAGAAGCTTGGGTTACCTTGGAAGAGGAAGATATGACTCATTTGAAAGCAAACCCTGAACTCCTCACTTGTGCAACACTCGATCCAAGTCCTTTAGCAATGAGTTCAGTTGCCTGA 1353 0.4398 MRVEVEIISREDIRPSSPTPSHLRVFSLSLLDHLIPSPYAPIILFYNSPKSNTTYLSEVPKRLQLLKKSLSETLTKFYPLGGKIKEDLSIECNDEGANFVLARVKCPLDEFLVQPQVTVLHKFLPVDLVSEGPNSGTYVTNIQVNIFECGGIAIGMCISHRILDGAALSTFIKGWTERAKGCNQSTQPNFIAPSLFPTNSPWFRDLSMWMWGSLFKQGKWVTRRFLFRNSAIATVKAQTPGTENSTRLQMVSAMLWKSLMGVSKARFGTQRPSFVTHLVNLRRKMDEALCPEHAMGNLLWLAAESVDDNEMGLEELVGKLRTAISRVDKEFVEELRGDKGRPTMQESLRAIGEMGSKSEVDYFGFSSWCNFGYYEADFGWGKPTWVSGAGSIDSVSMFMNLIILVDTRLGDGIEAWVTLEEEDMTHLKANPELLTCATLDPSPLAMSSVA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00261 450 Gene3D - 218 435 IPR023213 -
Vimu9g00261 450 Pfam Transferase family 4 433 - -
Vimu9g00261 450 PANTHER F21J9.9 6 433 - -
Vimu9g00261 450 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00261 Vimu-Chr9 3133746 3135098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00261 3 424 Monolignol Biosynthesis Gene Families AT5G48930 24.775 9.94e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00261 - - gmx:100305374 738.028