Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00147 ATGAGAGAGATCAAGGAGCATAGCACAATGTGCAGAAGGAGGAGTAGCAGCTTCATCTTCACCCTCTTCCTCCTCATTGGACCAATATCTTCCCTATCTTCTTCGACATCCATCAACAGAAGAATCCTCCACCAACCTTTTCTGCCTGAAGGGGGTTCCCCACCTCCCTCTGTTCCCCCAAACCCTCCTCCACAGCCATCTCCTTCACCTTCACCTCCAAACCCAAAGTACCCATTTTCCACCACACCCACCACCAATGCTTCCACACCCTTCTTCCCCACATACCCTTCTCCTCCACCTCCTCCCTCTCCTTCAGCCTTTGCTTCTTTCCCTGCTAACATATCCTCCCTCATCCTTCCCCAATCCTCAAAGTCCAAATCTTCCTCAAAAAAACTCGTCGCCGTCGCCATCTCCGCCGTCGCTTGCGCCCTCGCAGTTGTTGCTCTCTCAGCCTTCGTCTACTGTCGCCGCCGACGTCAGAGCTACTCCGCCGACGAGAAAACACTCAGATCCGACAGCAGCATCCGCCTCTTCCCCCGTGAAGCTTCTGCTGCCACCGGCGGGGGCCGCAAACCGAGAAACACCTCCTCTACCAGCTCCGAGTTTCTCTACCTTGGCACCATTGTTAACTCCCGTGGCGGCGGCGTCGATGAGCTCTCTGAGCCGCACGTTACTGCGTTGAACCCCCGTAAAATGGACTCGCCGGAGCTTCAACCGCTGCCACCGCTGGCGAGACAGTCTTCCAGGCTTAGAGAGGAAACGGCGGCGACGGTGGAGGATGATGAAGAGGAATTCTACTCGCCGAGAGGGTCGTTGAATGGAAGAGAAGGCTCCACCGGAACCGGATCGGGTTCTCGGCGAGTTTTCTCTGCCATTGCCGGAGAAAATTTAGTTGGTCGTAGCAGCAGTGAGTCTACCAGTTCATCTTACTCTTCTTCCTCGTCTGCTTCCCCGGATCGCTCTCATTCCATTAGTCTCTCTCCTCCAGTGAGCATAAGCCCCAGAAGATCACAACCCAAGTCGCCTGAAAATACCGTAGCACACCATTCTCCACCGCCACCTCCAGCGGCGATTAGAAGATCGCCGTCCTTGTCCACACTGTCGTCGCCTTCGCCGAGTTTCGGGCAGCACATGCCGTCGTCGTCTTCAATGTCGTCGACGCCGGAGCGAAGGGAGTGTCAGTCGCCATCGCTGTCTCCGCTTTCTCTGTCGCCGAGGAAAAACCCAAACCCAAACCCAGATGGTGAATCATCCCCAGGACTTGTTTTACTTGAAAAGACGCAATCTTTTGGCTCGTCCAAGTCCAAAAGCGACATTGGGTCGCCGAGATTGTCCAATGCTTCTTCCATTGGGAAGTCCTCGGCGTTTTCTCTGCCGTCGCCGGATAAAGGGATGAACTTGCATAATGGGTTGGATCAGTCTCCGACCATATCCGATGTTTCAGATCGGTTTAGACATTCTCCTCTGTCATCATTACATTTGTCACCGACATTACTTTCATCGCCGGAGAGGGAGTTGAGCCCTCCGTCTCAGCCTCAGCCACAGCCACAGCCTCAGCCTCAGCATCAGCCTCTGCCTCAACCTCAACCTCAACCTCAATCTCAACCTCAACCTCAACCGCAACCTTCACGTAAACACTGGGAGATTCCTGACTTATTGACACCAATCGGCGAAACACCGATGTTTTCAGCTCCTCAGAGGAAACAATGGGAAATTCCGGTTCTTTCGGTACCAATTGCTCCATCGAGTAGTAGTGTTTTAGCCCCTGCTCCACCACCGCCGCCGCCACCACCTCCGCCAGTTCTGCGACAACGTAAGCAGTGGGAGATGCCAGTGCCTTCTCCCGTGACGCCAGTGGGTCAGCAGGTTTCGAGGCCGCCTGCACTGTCGCCTCCTTCCAGGCCTTTTGTGTTGCAAACCCCAAATACAATGGTTTCTCCGGTGGAGTTGCCACCTGTTAGTTCCCAGAATTTGGAGGAGAGCTCTGAGGAGTCATCTAAACCTAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCAAGCTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATCGAAACTTTGTTTGTTGTGAATACGCCAAACCCAAAACCTAAGGACACAACTCCTCGCTCGGTTCTTGCCCCGCAAAATCAAGAGGATAGGGTGCTCGATCCTAAGAAGTCCCAGAACATTGCTATCTTGTTAAGAGCACTTAATGTGACTATAGAAGAAGTGTGTGAATCACTGTTAGAAGGTATCACTGATACACTTGGAACCGAACTGCTTGAAAGCTTGTTGAAAATGGCACCAAGCAAGGAGGAAGAACGCAAACTGAAGGAACATAAAGACGATTCTCCGACCAAGCTTGGTCCTGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGTCAATTTTGAGTCCGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTTTGGAGGCTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTGGAGGCCGTGCTCAAAACCGGCAACCGGATGAACGTGGGGACGAACCGAGGCGATGCACACGCATTCAAACTCGATACACTTCTCAAGCTCGTTGATGTCAAAGGCGCAGATGGCAAAACCACTCTACTTCACTTTGTGGTACAAGAAATCATCAGAACGGAAGGCGCTCGTCTCTCAGGCGCCAACCAAACAGTGGGCGCGAATTCGAACGACGATGCCAAGTGTAGAAGGCTTGGCCTGCAAGTAGTGTCTAGTCTGAGTTCCGACCTGGCGAATGTGAAGAAGGCAGCAGCAATGGACTCTGAAGTGCTAAGCAGCGAGGTGTCGAAACTCTCGAAAGGAATGGCACACATTGCAGAGGTTTTGCAGTTGAACGAAGCAGCAGGGTCAGAGGAAAGCAAGCAGAAGTTCAGAGAGTCAATGAACAGGTTCACAAGAATGGCCGAGGAGGAGATACTAAAAGTGCAAGCACAAGAAAGTGTGGCTTTGTCCCTTGTGAAGGAGATCACGGAGTATTTCCATGGGAACTTGTCAAAGGAAGAAGCTCATCCGTTTAGAATCTTCATGGTGGTGAGAGATTTCTTAACAGTTCTTGATAGGGTGTGCAAAGAAGTTGGGATGATAAACGAGAGAACGATGGTTAGTTCTGCACATAGATTCCCTGTCCCTGTGAATCCTATGCTTCCACAACCTCTTCCTGGTCTTGTCGGAAAGAGACAGTACAATTCCTCAGACGATGATAGTCCATCTCCTTAG 3339 0.5127 MREIKEHSTMCRRRSSSFIFTLFLLIGPISSLSSSTSINRRILHQPFLPEGGSPPPSVPPNPPPQPSPSPSPPNPKYPFSTTPTTNASTPFFPTYPSPPPPPSPSAFASFPANISSLILPQSSKSKSSSKKLVAVAISAVACALAVVALSAFVYCRRRRQSYSADEKTLRSDSSIRLFPREASAATGGGRKPRNTSSTSSEFLYLGTIVNSRGGGVDELSEPHVTALNPRKMDSPELQPLPPLARQSSRLREETAATVEDDEEEFYSPRGSLNGREGSTGTGSGSRRVFSAIAGENLVGRSSSESTSSSYSSSSSASPDRSHSISLSPPVSISPRRSQPKSPENTVAHHSPPPPPAAIRRSPSLSTLSSPSPSFGQHMPSSSSMSSTPERRECQSPSLSPLSLSPRKNPNPNPDGESSPGLVLLEKTQSFGSSKSKSDIGSPRLSNASSIGKSSAFSLPSPDKGMNLHNGLDQSPTISDVSDRFRHSPLSSLHLSPTLLSSPERELSPPSQPQPQPQPQPQHQPLPQPQPQPQSQPQPQPQPSRKHWEIPDLLTPIGETPMFSAPQRKQWEIPVLSVPIAPSSSSVLAPAPPPPPPPPPPVLRQRKQWEMPVPSPVTPVGQQVSRPPALSPPSRPFVLQTPNTMVSPVELPPVSSQNLEESSEESSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSVLAPQNQEDRVLDPKKSQNIAILLRALNVTIEEVCESLLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIVNFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGANQTVGANSNDDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLSSEVSKLSKGMAHIAEVLQLNEAAGSEESKQKFRESMNRFTRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYNSSDDDSPSP 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 299 345 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 422 460 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 635 661 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 361 415 - -
Vimu9g00147 1112 Pfam Formin Homology 2 Domain 662 1059 IPR015425 -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 45 83 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 228 286 - -
Vimu9g00147 1112 ProSiteProfiles Formin homology-2 (FH2) domain profile. 660 1085 IPR015425 -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 49 79 - -
Vimu9g00147 1112 Gene3D Formin, FH2 domain 654 1068 IPR042201 -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 272 286 - -
Vimu9g00147 1112 SMART it6_source 660 1074 IPR015425 -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 582 670 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 467 506 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 299 567 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 252 269 - -
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 585 604 - -
Vimu9g00147 1112 PANTHER FORMIN-RELATED 395 1099 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vimu9g00147 1112 MobiDBLite consensus disorder prediction 507 539 - -
Vimu9g00147 1112 SUPERFAMILY Formin homology 2 domain (FH2 domain) 591 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00147 Vimu-Chr9 1767710 1772839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00147 614 1101 FH2 protein (formin) Gene Family AT3G25500 76.423 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00147 - - var:108322602 1643.25