Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00146 ATGGAACAATTTAGACAAATTGGGGAGGCACTGGGGGCTTTGAAATCTGTGATGGTATTCCGGGAGAACATTCAAATAAATCAGAGGCAATGTTCTCTGCTTTTTGATGTGTTCAATTCTGCATATGAGTGTATTGCAGATGAGATTACACAGAACCTGCAATTTGAAGAGAAGAATGTGAAGTGGAAGATTTTAGAGCAACCCCTGAGAGAGATCCATAAAATTTTCAGAGAAGGTGAAACTTACATTAGGCAATGCATGGAAACAAAGGACTGGTGGGCAAAAGCCATTACCTTATGCCACAACACAGATTGTGTTGAGTTTCATATACACAATTTGCTTTGTTGCATGCCAGTAGTAATTGAAGCTATAGAGTCTGCAGGAGAAACATCAGGGTTGGATCAAGAGGAGATGCAAAGGAAGAAGTACATAAACTCTAACAAATACAAGAAAGAGTATAGAGACATGAAGCTTTTCCAGTGGAAATTTGGGAAGCAGTACCTCGTCACTCAGGACTTATGCAACCGTTATGATAGTGTTTGGAAGGAAGATAGATGGTTTCTTTACAACAAACTCCTAGAAAAGAAAGTGGAAGGTGTGAAAAAGTATGAGAAGAAATTGATAGATTTGCTTCTGAGAAATTTGGAAATAGCAGAATCAGTAGCAGGGAGGCTCCTTCCAAGCTCAATATTGGTTGGGTCTAAGGACTTTCAGGTGAGGAGAAGAATGGGGAATGCGAGTCAGTACAAGGAAATTTCATGGTTAGGTGAAAGCTTTGTGATAAGACATTTTACTGGGGATATTGAAGCTTTGCAACCTGAGATCATAGAGCTTTTATCTCTTTCCCATCCAAATATAATGGACTGCCATGGTGGTTTTACCGATGAGGAGAAGAAAGAATGCTTTTTGCTAATGGAACTCATGAGCAAAACCCTTTCCACCCACATCAAAGAGATTCACGGTCCAAGAAGGCGAATACCATTCTTGCTTCTCGTAGCAGTTGATATCATGCTTCAGATTTCCAGAGGAATGGAGTATTTGCATTCAAAGAAAGTATATCATGGAGAACTAAACCCTTCAAGCATTCTTGTTAAGCCTAGAAGTGCATCCCCAGAGGGTTACTTGCACGCCAAGGTAACTGGATTTGGACTAACTTCTGTCAAGGATTTGAATCAAAAAGGGAACACAAATCAGAATGGAACTCCCCCATTCATCTGGTACTCTCCTGAAGTACTTGAGCAGGAAAACTCAGGGGGCACACCAAACTCCAAGTACACAGAGAAATCTGATGTGTACAGTTTTGGAATGGTTTGCTTTGAGCTTTTAACTGGCAAAGTCCCTTTTGAAGATAGTCATCTCCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTCCCACTCAATTCACCCAAATATGTCATTAACTTGACAAAGAGATGTTGGCATATTGATCCACATCAACGTCCAAGCTTTTCTACCATATGTAGAGTTCTTCGTCATATCAAAAGATTTCTTATTATGAATCCTGGTTATAGTAGTCAGCCAGAACAACCAGTGCCACCAATAGATTATTGTGATGTAGAGTCACTGCTTCTGAAGAAGTATCCTTCTTGGGGAAGTTCTGAACCAGCACCAGATAATTCTGAGTCTGGAAGTGATGCTTCAGCCTGTGGTGATGAACTTGTTACCTCAGGGGATGAACCGTTTCCATCCACAGCTGAAAGGAAGTCTTTGCTTGGAAATGATATTATGAACAGAAAAATTATTATGTCCAGGAAATCTCTTGATTTGAAGCTCATCAAACAACCAGGCACATCGAAAGGGAGATCAGCAAGACCTCCACAAATGTCCCCTCGTGCAAGAAGTATGAGAATTACATCAGAGCACCATATATCAAGTCCAAGGGCAATGAGAAGAGTATCTTCTGGTCATGTCTCAGACTCTGAGCTTTCTTAG 1971 0.4084 MEQFRQIGEALGALKSVMVFRENIQINQRQCSLLFDVFNSAYECIADEITQNLQFEEKNVKWKILEQPLREIHKIFREGETYIRQCMETKDWWAKAITLCHNTDCVEFHIHNLLCCMPVVIEAIESAGETSGLDQEEMQRKKYINSNKYKKEYRDMKLFQWKFGKQYLVTQDLCNRYDSVWKEDRWFLYNKLLEKKVEGVKKYEKKLIDLLLRNLEIAESVAGRLLPSSILVGSKDFQVRRRMGNASQYKEISWLGESFVIRHFTGDIEALQPEIIELLSLSHPNIMDCHGGFTDEEKKECFLLMELMSKTLSTHIKEIHGPRRRIPFLLLVAVDIMLQISRGMEYLHSKKVYHGELNPSSILVKPRSASPEGYLHAKVTGFGLTSVKDLNQKGNTNQNGTPPFIWYSPEVLEQENSGGTPNSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHIDPHQRPSFSTICRVLRHIKRFLIMNPGYSSQPEQPVPPIDYCDVESLLLKKYPSWGSSEPAPDNSESGSDASACGDELVTSGDEPFPSTAERKSLLGNDIMNRKIIMSRKSLDLKLIKQPGTSKGRSARPPQMSPRARSMRITSEHHISSPRAMRRVSSGHVSDSELS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00146 656 SUPERFAMILY Protein kinase-like (PK-like) 265 529 IPR011009 -
Vimu9g00146 656 ProSiteProfiles Protein kinase domain profile. 226 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00146 656 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Vimu9g00146 656 Pfam Protein tyrosine and serine/threonine kinase 269 502 IPR001245 GO:0004672|GO:0006468
Vimu9g00146 656 MobiDBLite consensus disorder prediction 604 656 - -
Vimu9g00146 656 Gene3D Transferase(Phosphotransferase) domain 1 254 515 - -
Vimu9g00146 656 MobiDBLite consensus disorder prediction 543 579 - -
Vimu9g00146 656 FunFam Kinase family protein 234 516 - -
Vimu9g00146 656 PANTHER SERINE-THREONINE PROTEIN KINASE 261 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00146 Vimu-Chr9 1761061 1763974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00146 274 503 MAP Kinase Kinase Kinase AT5G58950 29.487 1.04e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vimu9g00146 PK_Tyr_Ser-Thr 4.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00146 - - gmx:100813704 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00146 9 1761061 1763974 Vimu9g00146 9 1761061 1763974 ECH