Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00130 GTTTCTGATACCATGGAGGCTCTCAATGCTGCAGCTTTGACCCCTCTGTCTGTGCTTTCTGATACAAAGACAACAAGAAAACAACCTCCAGTTTCTTCATGCAAAGGTTCAAGCTTTTCCACCTTTACCGACAAGAAACCAACGTTGCTGCAAAGTTGCTTATCAAAAAGTCTTCATGGGGGGTTGTTTCTTGCAGCTTCAATTATGAGTGGTGATGTTGCCTCAGCTTTGACGTACGAGGAGGCACTGGGGCAAACTTTGAGTCTCCCCGGTACTGGAGACTTTGATGTGAACGGTTTTGTGGAGAGTGCCACTGGCTTTGCAACTGAGAACCCTGCAATTGTTGCTGGGGGAGTGGCTATTCTGGCACTGCCATTGGTTTTGTCTCAGGTTTTTAAGAAGCCTAAGGCGTGGGGTGTTGAATCTGCTAAGAATGCATATGCAAAACTTGGGGCTGATGAGAATGCTCAGTTGCTTGATATCAGAGCTCTAGTGGAGATTAGGCAAGTGGGGTCCCCAGATGTTGGGGGTCTGAGGAAGAAGGCAGTGTCGATTGCTTATAAGGGTGATGATAAGCCAGGGTTCCTTAAGAAGCTTGCATTGAAGTTTAAGGAACCACAGAATACCACATTGTTTATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTTACTGTTAATGGATTTAAAGCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCGAGAGGATGGAAGAGTAGTGGTCTTCCTTGGTTAGCACCAAAGAAGACACTGAGTTTGGATAATCTAACGGATGCTATATCTGAAGTAATTGGAGATTCATCTGATGGTGTTGCTCTTACTCTTGGGATTGCTGCAGGAGCTGCTGGACTGAGCCTGTTAGCTTTTTCTGAGATAGAATCAATTCTCCAAGTTGTAGGATCAGCTGCACTTATTCAATTTGCAAGCAAGAAGCTTTTATTTGCTGAGGACCGAAAGCAAACTGTGAAACAACTTGATGAGTTCTTGAACACCAAAGTTGCCCCTAAAGAACTTGTTGATGAAATAAAGGATATTGGAAAGGCTCTTCTACCAACCTCTACCAGTAAGGCTCTTCCTGCTCCAGCAGACAAAAGTACAGAGCTTGCTACAGCTGATAGCATTGCACAGACAACAGTAGCTACTCCAGTGACCAATGCAGATGCAGTAGCTCCTGCAGTAAACTCAGTCCCCAAAGCTGAAATCAAGGAAGAATCACTTCCTGTGCCACCAAGGCCACTTTCACCATACCCATATGTGATGTCTTACTTTCCTTCTCTACTAGTTTTTCACTTTCTGTGCTGA 1338 0.4462 VSDTMEALNAAALTPLSVLSDTKTTRKQPPVSSCKGSSFSTFTDKKPTLLQSCLSKSLHGGLFLAASIMSGDVASALTYEEALGQTLSLPGTGDFDVNGFVESATGFATENPAIVAGGVAILALPLVLSQVFKKPKAWGVESAKNAYAKLGADENAQLLDIRALVEIRQVGSPDVGGLRKKAVSIAYKGDDKPGFLKKLALKFKEPQNTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWKSSGLPWLAPKKTLSLDNLTDAISEVIGDSSDGVALTLGIAAGAAGLSLLAFSEIESILQVVGSAALIQFASKKLLFAEDRKQTVKQLDEFLNTKVAPKELVDEIKDIGKALLPTSTSKALPAPADKSTELATADSIAQTTVATPVTNADAVAPAVNSVPKAEIKEESLPVPPRPLSPYPYVMSYFPSLLVFHFLC 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00130 445 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 136 267 - -
Vimu9g00130 445 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 5 431 IPR044240 -
Vimu9g00130 445 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 140 257 IPR036873 -
Vimu9g00130 445 Gene3D - 137 267 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00130 Vimu-Chr9 1510299 1514181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00130 5 374 Sulfurtransferasese or Rhodanese AT4G01050 63.830 1.33e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00130 K17525 - gmx:100810796 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00130 9 1510299 1514181 Vimu9g00130 9 1510299 1514181 ECH