Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00117 ATGAAATACTTAAGTTCTTACTTCACCATTGACATTCTGTCAATTATTCCACTTCCTCAGATGGTCATTTTAGCTATGATCATATCCCCAACATGCTCAGCTCCTTACGTGGGAAAGGATTTGTTGAAGTATACAGTAATAGCCCAGTACGTGCCAAGGCTTCTGCGGATCTACCCTTTATTCAAAGAAGTAACAAGCACTTCTGGCATATTGACTGAGACAGCATGGGCTGGAGCAGCTTACAATCTTTTTCTCTACATGCTAGCAAGTCATAATCAAGGTTCAGTTGGGCAAGGTCTCGAGACAAGTACTTATGTAGGGGAGATAATCTTTGCTATCTCCATTGCTGTCTTTGGATTGGTTCTATTTGCATCACTTATTGGAAACATGCAGGTACTATGA 402 0.408 MKYLSSYFTIDILSIIPLPQMVILAMIISPTCSAPYVGKDLLKYTVIAQYVPRLLRIYPLFKEVTSTSGILTETAWAGAAYNLFLYMLASHNQGSVGQGLETSTYVGEIIFAISIAVFGLVLFASLIGNMQVL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00117 133 Pfam Ion transport protein 2 91 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Vimu9g00117 133 SUPERFAMILY Voltage-gated potassium channels 2 131 - -
Vimu9g00117 133 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 95 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00117 Vimu-Chr9 1369707 1371378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00117 1 96 Ion Channels AT1G01340 65.625 1.08e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00117 K05391 - gmx:100795201 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01551 2 10802301 10808017 Vimu9g00117 9 1369707 1371378 PCT