Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00087 ATGAAGTCGCTGATTTATGTGCTGAAAAAGGGAACGGAAACTTCGAAGCAGAACGCAGCATGCGCGCTTCTAAGCCTGACGTTGGTGGAAGAGAACAAAACCTCCATCAGGGCTTCCAGAGCGATACCGCCCTTGGTTTCGCTTCTTCTAAACGGTTCGAGCAGAGGGAAGAATGACGCACTGACGACGCTTTATAAGTTGTGTTCTTTGAGGCAGAACAAGGAGAGGGCAATGAGCGCCGGTGCGGTGAAACCGCTAGTGAAGCTGGTGGCGGAGCAGGGAAGCAGCATGGCGGAAAAGACCATGGTGGTGCTGAACAACCTAGTAGGGATTCAGGAAGGGAAGGACACAATTGTGGAAGAAGGTGGCATCGCTGCTCTTGTGGAAGCCATTGATGGGTCTATTAACGGGAAGGAGTTCGCGGTTCTGACCCTTCTTCAGCTCTGTGTTGACAGTATTAGAAACATAGGGTTTCTTGTTAGAGGGGATGGGATTCCTCCTCTTGTTGCCCTTTCTCAAACTGGGAGTGTTCGAGTTAAGCACAAGGTCAGTCAAATCAAACCCCACTTTTTTTGTGAATAA 582 0.4966 MKSLIYVLKKGTETSKQNAACALLSLTLVEENKTSIRASRAIPPLVSLLLNGSSRGKNDALTTLYKLCSLRQNKERAMSAGAVKPLVKLVAEQGSSMAEKTMVVLNNLVGIQEGKDTIVEEGGIAALVEAIDGSINGKEFAVLTLLQLCVDSIRNIGFLVRGDGIPPLVALSQTGSVRVKHKVSQIKPHFFCE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00087 193 Pfam Armadillo/beta-catenin-like repeat 31 69 IPR000225 GO:0005515
Vimu9g00087 193 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Vimu9g00087 193 Gene3D - 1 186 IPR011989 -
Vimu9g00087 193 PANTHER U BOX DOMAIN-CONTAINING 2 185 - -
Vimu9g00087 193 SUPERFAMILY ARM repeat 1 183 IPR016024 -
Vimu9g00087 193 SMART arm_5 70 110 IPR000225 GO:0005515
Vimu9g00087 193 SMART arm_5 111 150 IPR000225 GO:0005515
Vimu9g00087 193 SMART arm_5 29 69 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00087 1 190 U-box Gene Family AT2G23140 42.932 6.48e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00087 - - gmx:100818658 295.819