Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00065 ATGAAGGTTCCAATGGAGGAAAAACCATTCCCTGCATGGTCATGGTCTGTTGAACAGTGTTTGAAAGAGTATGGAGTGAAACTGGACAAAGGTCTGAGTACTCATGAGGTTCAGAAGCGGCGCGAGAAGTATGGTTGGAATGAGTTAGCAAAGGAGAAAGGGAAGCCGTTGTGGGAACTAGTGTTGGAACAATTTGATGACATGCTGGTTAAGATACTTTTTGACTCTGGGAAGTCTGGATTTGATGCATATGTGGAGCCACTTGTGATCATTTTGATTTTGGTCCTTAATGCCATTGTTGGAGTTTGGCAAGAGAACAATGCTGAGAAGGCTCTTGAAGCCCTCAAAGAGTTGCAGAGTGAGTCTGGGAAAGTGTTAAGGGATGGCTATTTTGTGCCTGATTTGCCTGCTAGAGAGCTTCTTCCTGGTGATATTGTGGAGTTGAATGTTGGAGATAAGCAATGCCAGTTCTCAAGGGGACAAGTCCTGTTTTCTTGGAAGACTGTGAGTTGCAGGCTAAAGAAAACATGGTATTTGCAGGCACCACTGTTGTCAATGGGAGTTGTGTATGTATCGTTATCACCACAGGAATGGACACTGAAATTGGAAAGATACAGAAGCAGATACACGAGGCTTCTCAAGAGGACAGTGACACCCCTTTGA 663 0.4434 MKVPMEEKPFPAWSWSVEQCLKEYGVKLDKGLSTHEVQKRREKYGWNELAKEKGKPLWELVLEQFDDMLVKILFDSGKSGFDAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQSESGKVLRDGYFVPDLPARELLPGDIVELNVGDKQCQFSRGQVLFSWKTVSCRLKKTWYLQAPLLSMGVVYVSLSPQEWTLKLERYRSRYTRLLKRTVTPL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00065 220 SMART Cation_ATPase_N_a_2 11 83 IPR004014 -
Vimu9g00065 220 Pfam Cation transporter/ATPase, N-terminus 13 74 IPR004014 -
Vimu9g00065 220 Gene3D - 63 108 - -
Vimu9g00065 220 Gene3D - 30 153 - -
Vimu9g00065 220 PANTHER CALCIUM-TRANSPORTING ATPASE 19 153 - -
Vimu9g00065 220 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 121 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00065 Vimu-Chr9 804881 805684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00065 6 153 Primary Pumps ATPases(2) AT4G00900 69.939 3.80e-71 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00065 K01537 - gmx:100800498 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00065 9 804881 805684 Vimu9g00065 9 804881 805684 ECH