Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00061 TTGGGTGGAGACAATCCGCCAGAAAGATTAGCACGAATACAAGATGTCTTTAATCTTGCAGGGACTCAGCTCTTAGTTGGCTTAAAAGAAAAGAAAAAAAGGATTTGTCCTGATATATTCATCTCTGAAACCCCAAGGCACTCACCTCCGCCACTCCTGCACCCACTGCCGTCACAACCTCCGATCAAAAGGTCGCTGCGAGGGGGCTGTCCACGGCTTCGCCGGCGCATTCGTCGGAAGAGCCACCGCCCTTCACGCCGGACTGCCATCTCGTCCTTTCTTCTTCGCGGAACCGGCCCCAACTCTGAGATCCTACCGTTCTTGCCGCCTTCACCGGTCGTCGTCGCAACGACCTGGATCGACGAGGCTGTCGGCGCCTTCAACGCCACTCTCCCGCGCAAGTCGCCGCCGACCAAGCTAGGGTCGTCGCTCCTCCTCACCAGCCAAGAACACCATCGCGGACCACCATCTTCGTCCTCTCTCGCGCAGACCTTGCTTCCATCGAACCAGGTTGAAAGCTCAAACCCCAGCGACGTAACAAATGCAAAGAGATTTGACATCGTTGTTTCGGTGGCGATGGAGTTGGAGTATTTGCACCACGCGTGTGAGCCTTCGGTGATTCATGGAGATATAAAGTTGAGTAATGTGTTGTTGGATGAGGATTTTGGAGCGAAGATTGGGGATTTTGGGCTTGCTAGGGTTAAGGCGGTGGAGGATCTAGGAATGGTGGAGGAGAAGAAGGAAAGGGTTGTAGAAATTGGGGTCAAGGAGTTTGGGGTGATGGAGGAGGGGGAGAGTGTGAGTGTGGTGGATGTTGACCGGTCGCCGGAGAGTTGTCCTTTGAGGGTGATAAGTTGA 858 0.5408 MGGDNPPERLARIQDVFNLAGTQLLVGLKEKKKRICPDIFISETPRHSPPPLLHPLPSQPPIKRSLRGGCPRLRRRIRRKSHRPSRRTAISSFLLRGTGPNSEILPFLPPSPVVVATTWIDEAVGAFNATLPRKSPPTKLGSSLLLTSQEHHRGPPSSSSLAQTLLPSNQVESSNPSDVTNAKRFDIVVSVAMELEYLHHACEPSVIHGDIKLSNVLLDEDFGAKIGDFGLARVKAVEDLGMVEEKKERVVEIGVKEFGVMEEGESVSVVDVDRSPESCPLRVIS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00061 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Vimu9g00061 285 PANTHER OS07G0586332 PROTEIN 160 269 IPR044576 -
Vimu9g00061 285 MobiDBLite consensus disorder prediction 46 68 - -
Vimu9g00061 285 SUPERFAMILY Protein kinase-like (PK-like) 176 239 IPR011009 -
Vimu9g00061 285 ProSiteProfiles Protein kinase domain profile. 59 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu9g00061 285 Gene3D Transferase(Phosphotransferase) domain 1 159 260 - -
Vimu9g00061 285 Pfam Protein kinase domain 180 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00061 Vimu-Chr9 776897 778447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g00061 171 243 Receptor kinase-like Gene Family AT4G29180 43.836 7.82e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Vimu9g00061 Pkinase 1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00061 - - gmx:100814933 128.642