Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu9g00029 | ATGGCTACCCATATTTGTCTCTCTCTTTGCTTCTTCTACATCACAACCCTCAACCTTGTTTTGGCTCGGTCTGACAATTATATCATTCACATGGATATATCAGCCATGCCCAAAGCATTCTCCACCCAGCACACTTGGTATCTATCCACTCTTTCTTCAGCGTTGAAAAGTTCCAAACCCACCAGTAATAATCTTAAATCTATTATTTCTTCCAAGCTGCTTTACACATACACCAATGTCATCAATGGTTTCAGTGCAAACCTTTCCCCTGAAGAGCTTGAAGCTCTGAAAACCTCCCCCGGTTATGTTTCTTTCTTGCGAGATTTACCAGCCAAGCGTGACACAACACACTCACCGTCCTTCCTTGGCCTCAACCCCAATGAAGGGGCGTGGCCAGCGGCACAGTTTGGCAAGGATGTCATTGTTGGTTTGGTGGACACTGGAATTTGGCCAGAAAGTGAAAGCTTCAGAGACGATGGAATGGGTGGGGTTCCTTCTCGATGGAAAGGGCAATGTGAAAGTAGCATCAAATGCAACAAGAAGCTCATTGGAGCAAGGTTCTTTAACAAAGGGTTGTTGGCAAAGCATCCCAACATCACCATAGGTGCGAACTCAACACGTGACACTGAGGGTCATGGAACTCATACATCAAGCACTGCAGCTGGGAGCGTAGTCGAAGTTGCATCGTACTTTGGGTATGCTTCTGGATCAGCCACGGGAATGGCTTCACGTGCGAGAGTGGCCATGTACAAAGCCCTGTGGGAAGATGGAGCTTACATGTCTGATATAATAGCCGCAATTGATAGTGCAATATCTGATGGGGTAGATGTTCTTTCTCTGTCATTTGGCTTTGATGATATACCTTTGTACGAGGACCCTGTTGCTATAGCCACGTTTGCAGCAATGCAGAAAAACATTTTTGTGTCGACGTCAGCAGGGAATGAAGGGCCTTTCCTTGGAAGACTTCACAACGGAATACCATGGGTCATAACTGTGGCTGCCGGCACTTTGGACCGTGAATTTCACGGGGTTCTTACTCTTGGTAATGGAGTCCAAGTAACTGGCATGTCTCTCTATCATGGAAACTTCTCCTCTAGCCATGTTCCGATTGTTTTCATGGGGTTGTGCGACAGAGTGAAGGAACTGGCCAAAGTGAGGAGCAAGATTGTGGTGTGTGAAGACAATGGAACAATCATTGATCTTCAAGTGTCTAACATTTTTGAAGCAAATGTTGTCGCGGCAGTGTTCATAACAAACAGTTCCGATAGTTCATTTTTCTTAGATAATAGCTTTGGAACAATTGTTATTTCCACCACAGATGGGGAAATTGTCAAAGCTTACATCAAGAGCAATAACTCTAGTGCGAAAGCAAGCATGTCTTTTGAGATGACAGTTTTGGGTACTAAACCAGCACCGAGTGTGGATAGTTACAGTTCCCGAGGACCTTCGAGTAGTTGTCCATTTGTGTTGAAACCGGACATCACTGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAATCTTCCAGTGGAAGTGTTTGGGTCGCAAAGTATTTTCAGTAACTTCAATTTGTTAAGTGGCACATCCATGGCATGCCCTCATGTTGCTGGTGTGGCAGCATTGTTAAGAGGAGCACACCCTGAATGGAGTGTTGCATCCATTAGGTCAGCCATCATGACAACATCAGACATGCTTGATAACACCTTAGGGCCCATCAAAGACATTGGCAACGATAACAAACGAGCCTCGCCTTTGGCATCTGGTTCTGGTCACATCAACCCTAATAAAGCCATTAACCCTGGCCTTGTTTACGATGCTGGAGTTCAAGATTATGTTAATCTGCTCTGCGCTCTTGGCTTCACCCAAAGAAACATCACCGTCATCACAGGAACCTCTTCCAATGATTGTTCCAAAGCTTCCTTGGACCTCAACTACCCTTCTTTTATTGCTTTGTTCAACAGCAACAATTCAAGTACAGCACAAGAATTTCAGAGAACAGTGACCCATGTTGGGGAGGGACCAGCAAGCTATGCTGCCAGCTTTATACCGGTGGAAGGGTACGAAGTCAGTGTGATCCCTGAATTGTTAGTGTTCAAGGAGAAGTACGAGAAGTTGAGCTACACGTTGAGAATTGAAGGTCCAAGAAAGAAGAAAGAGAAGAAAGTTGCTTTTGGGTATCTCGTTTGGACGGACGTCCAACATGTGGTTAGGAGTCCCATTGTGGTCACCACTCTCAATTTCGACTTCTGA | 2253 | 0.4532 | MATHICLSLCFFYITTLNLVLARSDNYIIHMDISAMPKAFSTQHTWYLSTLSSALKSSKPTSNNLKSIISSKLLYTYTNVINGFSANLSPEELEALKTSPGYVSFLRDLPAKRDTTHSPSFLGLNPNEGAWPAAQFGKDVIVGLVDTGIWPESESFRDDGMGGVPSRWKGQCESSIKCNKKLIGARFFNKGLLAKHPNITIGANSTRDTEGHGTHTSSTAAGSVVEVASYFGYASGSATGMASRARVAMYKALWEDGAYMSDIIAAIDSAISDGVDVLSLSFGFDDIPLYEDPVAIATFAAMQKNIFVSTSAGNEGPFLGRLHNGIPWVITVAAGTLDREFHGVLTLGNGVQVTGMSLYHGNFSSSHVPIVFMGLCDRVKELAKVRSKIVVCEDNGTIIDLQVSNIFEANVVAAVFITNSSDSSFFLDNSFGTIVISTTDGEIVKAYIKSNNSSAKASMSFEMTVLGTKPAPSVDSYSSRGPSSSCPFVLKPDITAPGTSILAAWPQNLPVEVFGSQSIFSNFNLLSGTSMACPHVAGVAALLRGAHPEWSVASIRSAIMTTSDMLDNTLGPIKDIGNDNKRASPLASGSGHINPNKAINPGLVYDAGVQDYVNLLCALGFTQRNITVITGTSSNDCSKASLDLNYPSFIALFNSNNSSTAQEFQRTVTHVGEGPASYAASFIPVEGYEVSVIPELLVFKEKYEKLSYTLRIEGPRKKKEKKVAFGYLVWTDVQHVVRSPIVVTTLNFDF | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu9g00029 | 750 | CDD | Peptidases_S8_3 | 114 | 564 | IPR034197 | - | |
| Vimu9g00029 | 750 | Pfam | Subtilase family | 137 | 568 | IPR000209 | GO:0006508|GO:0008236 | |
| Vimu9g00029 | 750 | Gene3D | - | 338 | 466 | - | - | |
| Vimu9g00029 | 750 | Pfam | Peptidase inhibitor I9 | 27 | 110 | IPR010259 | - | |
| Vimu9g00029 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 527 | 543 | IPR015500 | - | |
| Vimu9g00029 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 208 | 221 | IPR015500 | - | |
| Vimu9g00029 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 137 | 156 | IPR015500 | - | |
| Vimu9g00029 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 528 | 538 | IPR023828 | - | |
| Vimu9g00029 | 750 | Gene3D | - | 616 | 746 | - | - | |
| Vimu9g00029 | 750 | SUPERFAMILY | Subtilisin-like | 114 | 603 | IPR036852 | GO:0004252|GO:0006508 | |
| Vimu9g00029 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 20 | 112 | IPR037045 | - | |
| Vimu9g00029 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 118 | 599 | - | - | |
| Vimu9g00029 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 28 | 743 | IPR045051 | - | |
| Vimu9g00029 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 139 | 347 | - | - | |
| Vimu9g00029 | 750 | CDD | PA_subtilisin_like | 344 | 455 | - | - | |
| Vimu9g00029 | 750 | FunFam | Subtilisin-like protease SBT1.9 | 16 | 113 | - | - | |
| Vimu9g00029 | 750 | Gene3D | Peptidase S8/S53 domain | 139 | 612 | IPR036852 | GO:0004252|GO:0006508 | |
| Vimu9g00029 | 750 | Pfam | Fibronectin type-III domain | 643 | 743 | IPR041469 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu9g00029 | Vimu-Chr9 | 280367 | 282619 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu9g00029 | 1 | 746 | Subtilisin-like Serine Gene Family | AT5G67090 | 46.094 | 0.0 | 630 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu9g00029 | - | - | gmx:100783026 | 1190.25 |